Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq264 129 5e-25 >seq264 Length=644297 Score = 129 bits (142), Expect = 5e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || ||||||||| ||||||| || ||||| ||| | || Sbjct 590766 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACTATTACACTCGAAGTTGAATCCTCT 590707 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| ||||| || || || ||||| Sbjct 590706 GACACCATCGACAACGTCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGATCAG 590647 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTC-CGATTACAA 27166 ||||| | || | |||||| || || |||||||| | || |||| ||| ||||| Sbjct 590646 CAGCGCCTCATCTTCGCCGGAAAGCAGTTGGAAGATGGA-CGTACGTTGAGCGACTACAA 590588 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216 ||| || |||||||||||||| || ||||| | ||| | || || |||| Sbjct 590587 CATCCAGAAGGAGTCGACCTTGCACTTGGTGCTCCGTCTTCGTGGCGGCA 590538 Score = 82.4 bits (90), Expect = 7e-11 Identities = 123/175 (70%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069 ||||||| ||| | || || ||||| || || | |||| | || || | ||||| Sbjct 591200 TGACCGGAAAGACGATCACCCTTGAGGTTGAGTCTAGCGACACCATCGACAACGTCAAGA 591141 Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129 || ||||||||||| || || || ||||| || || ||||| || || | |||||||| Sbjct 591140 CCAAGATTCAAGACAAGGAGGGAATCCCACCAGACCAGCAGCGCTTGATCTTCGCCGGCA 591081 Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGAC 27184 | || | || || | ||| | || || |||||||| || |||||||| || Sbjct 591080 AGCAGCTCGAGGATGGCCGAACCCTCTCAGACTACAACATCCAGAAGGAGTCCAC 591026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434912746060800