Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq520 116 3e-21 seq264 114 9e-21 >seq520 Length=276588 Score = 116 bits (128), Expect = 3e-21 Identities = 136/181 (75%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 23619 TTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGT 23678 |||||| |||||||||||||| || || ||||| || || || || ||| | |||||| | Sbjct 100574 TTTCGTCAAAACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACTAT 100515 Query 23679 TGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTT 23737 || ||| | || || || || ||||| || || | |||||||| |||||||| | Sbjct 100514 CGACAATGTCAAGAC-CAAGATCCAAGACAAGGAGGGAATTCCGCCAGACCAACAGCGAT 100456 Query 23738 TAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAA 23797 |||| ||||| || || ||| |||| || | ||| || || |||| |||||||| |||| Sbjct 100455 TAATCTTTGCTGGAAAGCAATTGGAGGATGGACGTACCTTGAGCGACTACAACATCCAAA 100396 Query 23798 A 23798 | Sbjct 100395 A 100395 >seq264 Length=644297 Score = 114 bits (126), Expect = 9e-21 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || |||||||| || || || || || ||||||||||| ||| | Sbjct 590766 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACTATTACACTCGAAGTTGAATCCTCT 590707 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || | || || || || ||||| |||||| | || |||||||| Sbjct 590706 GACACCATCGACAACGTCAAGAC-GAAGATCCAGGACAAGGAAGGTATTCCTCCAGATCA 590648 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || ||||| || || ||||||| | ||| || || |||| ||||| Sbjct 590647 GCAGCGCCTCATCTTCGCCGGAAAGCAGTTGGAAGATGGACGTACGTTGAGCGACTACAA 590588 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || || ||||| || || || || || Sbjct 590587 CATCCAGAAGGAGTCGACCTTGCACTTGGT 590558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338005315728320