Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq597 168 9e-37 seq110 86.0 9e-12 >seq597 Length=589508 Score = 168 bits (186), Expect = 9e-37 Identities = 450/683 (66%), Gaps = 6/683 (1%) Strand=Plus/Minus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 |||||||| || | |||||||| | | |||||| |||| | | || || ||||| Sbjct 282568 CCAGGGCACTCGTGAGGGCACATGAGAGTCCAGTCGCCATTCTGTTCGACGCGCTTCATG 282509 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 || || || || ||||| | ||| || ||||| || | | |||||| || || Sbjct 282508 AACAGGTCGGGAATCCACAAGGCATAGAAAAGATCACGAGCACGCGCTTCTTCTTTGCCG 282449 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 |||||| | ||||| | | | | | ||| | |||||||| || || || || Sbjct 282448 TGGTTCTTTCTCAGATCTAACCAGTTGAAGACATCGGCGTGCCATGGCTCGAGGTAGATG 282389 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | ||||| || || || || || ||||| | || | || || | | | Sbjct 282388 GCGAATGCACCAGGACGCTTGTTGCCACCTTGATCAACGTAGCGAGCAGTCGCGTCAAAG 282329 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 || | | ||| |||| || |||||| ||||| || |||||||| ||| || |||| Sbjct 282328 ACACGGAGCATAGGAACAAGACCGTTCGATGTGCCGTTTGTTCCTCCAATGTATGATCCA 282269 Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314 | || || || | ||| | || || || || || |||| || || | ||| Sbjct 282268 GTGGCTCGGATGCGATGTATGTTAAGGCCGATACCACCAGCGGTCTTTGAAATCATAGCA 282209 Query 78315 CAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAA 78374 ||| || | || |||||||||||||| |||||||| ||| || ||| || || || Sbjct 282208 CAAGTCTTGAGGGTGTCGTAGATACCCTCGATACTGTCCTCCTTCGTGTCAATGAGGAAG 282149 Query 78375 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTA 78434 || || | ||| | ||| || ||||| || || | ||| || || || ||||| Sbjct 282148 CAAGACGAGAGTTGCGGTTGAGGTGTGCCTGCGTTGAAAAGTGTGGGGGAGGCGTGCGTG 282089 Query 78435 AACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATG 78493 || |||| | ||| | |||| ||||| || | |||||| ||||| |||||| | || Sbjct 282088 AAGTATTTGTTAGACATGTAG-TTGTACGTCTGAATAGCAGATTCAATGTCCTCTCCGTG 282030 Query 78494 AATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTAT 78553 ||| || || || |||||||| | |||||| || || | ||| | ||| |||| Sbjct 282029 AATGCCGACTGCCACACGCATGATCATATGTTGTGGACGCTCAGCGACCTTGCCGCTTAT 281970 Query 78554 TTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 78611 | | | ||||||| |||| || || || ||||| || | ||| ||||| ||| Sbjct 281969 TCGGAGTAGGTATGATCGCTCCAGGGTCTTGAAGCCAAAGTATTGGTAATTGAAA--TCT 281912 Query 78612 CTCTCGTAAATAATAACAGAATT 78634 || ||||| | ||| |||| || Sbjct 281911 CTGTCGTATACAATGGCAGAGTT 281889 Score = 100 bits (110), Expect = 4e-16 Identities = 374/582 (64%), Gaps = 16/582 (3%) Strand=Plus/Minus Query 76770 TTCTT-ATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACAT 76828 ||||| ||| | || ||||| || || | || || | | || || || |||||||| Sbjct 283812 TTCTTGATCGACAGTGAACTGGATGGGTGCTGAAGCAGCCATGGTTCGGAGGTAGTACAT 283753 Query 76829 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACT 76888 ||||| || ||||||| |||| || || ||||| || | ||| | Sbjct 283752 TCCAGTCTTGAGACCCATCTTCCAACCAGCAAAGTGCATCGAAGTAATCTTGC-----CC 283698 Query 76889 AGGATCGGCT-----ATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTA 76943 | | |||||| || ||||| |||| |||| |||||| ||||| || || | | Sbjct 283697 ATGGTCGGCTCTTTCATGTGAATGTTCAAGCTCTGAGATTGATCAATGAAGGCGCCACGA 283638 Query 76944 TCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGT 77003 || || ||||| | |||||||| || |||||||||| || ||| ||| Sbjct 283637 TCCGCAGCCATGGTGATAATGGTACGCTGGCTGATTTCCCAAACCGTCTTGTAAAGGGCC 283578 Query 77004 TTGATATCATCTGGAAGGTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTA 77060 |||||||| || |||| || | | || || || |||||||| |||| || || | Sbjct 283577 TTGATATCGTCGGGAATATTAGGAATGTTCTGGATAGAACCACCCTCTGCAATGATACGA 283518 Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTA 77120 ||||| || | || ||| | | |||| | | || | || || || || Sbjct 283517 TTCTTCATGTTGTCCGACCAAAGACCCATCTCGACGAGATCTTTGAGCAGCCATGGGTTG 283458 Query 77121 ACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 77180 || | ||| ||||| |||| | || | ||||| ||| ||||| || ||||| || Sbjct 283457 ACGACTTGGAATTCCCCAGCAAGCACACGACGAGAGTAGATATTTGACGTGTATGGCTCG 283398 Query 77181 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAAT 77240 | | || ||| || | |||||||| || ||||||||||||||||| | || ||| Sbjct 283397 AAGCACTCGTTGAAACCGAGAATTTGAGATGTGGAAGCAGTTGGCATAGGAG-CAACAAG 283339 Query 77241 AAACTA-TTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAG 77299 || | || | | ||| || | |||| | | | || || | | ||| ||||| || Sbjct 283338 AAGTGAGTTGCGAATACCGTGCTTCTTGATATCAGCCTTGAGCGAGTCCCAGTCCCAGAG 283279 Query 77300 ATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCC 77341 ||| | ||| || | ||| | ||||| || ||||| || Sbjct 283278 ATCCGTAGGAGTGACGTTCCACATGTCGTACTGGAGAATACC 283237 >seq110 Length=125662 Score = 86.0 bits (94), Expect = 9e-12 Identities = 168/248 (68%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 48438 TCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATC 48497 ||||| || || ||||| || || || ||||| |||||||| |||| ||||||| | | Sbjct 62927 TCGGAATGGATGTTTTCCATGGCGATTTGAAAACCGTAAAAGCATCGGGCTTCTGGAACC 62986 Query 48498 TGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCA 48557 || || || | | ||| ||||| | ||||| || || || ||||| || || Sbjct 62987 TGAACTTCGTTGCTAAAACGTTCGAGGAGGTTCTCGTTGACGATGCCATCCGATGCTGCG 63046 Query 48558 AAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT---TTATTCCAG 48614 |||||||| | | ||| || ||| | ||||| | |||| || |||||| Sbjct 63047 AAAAATGCGAGAATGTGTGAGATGAAAAAGCGTTCGTCGTCGTTCAGGCGGTTGTTCCAG 63106 Query 48615 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTT 48674 || | ||||| || | ||| | ||||| || ||||||||||| ||| ||| || Sbjct 63107 TCTGGAACGTCTTTGGAGAGATCGATCTCTTCGGCGGTCCAAAATGAGGCCATTGCCTTC 63166 Query 48675 TTATACAT 48682 || ||||| Sbjct 63167 TTGTACAT 63174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694659769305600