Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq264 111 4e-19 seq265 89.7 1e-12 seq520 84.2 5e-11 >seq264 Length=644297 Score = 111 bits (122), Expect = 4e-19 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA--GGCTTTTCC 151965 || ||||| || ||||||||||| ||| || || | |||||||| | ||||| | Sbjct 590570 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCCATCTTCCAACTGCTTT--C 590627 Query 151966 CGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTT 152025 |||||||||| || | |||||| || | | || |||||||| || || || || | Sbjct 590628 CGGCGAAGATGAGGCGCTGCTGATCTGGAGGAATACCTTCCTTGTCCTGGATCTTCGTCT 590687 Query 152026 TGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085 |||| | || | | |||| || || ||||| || |||||||| ||||| ||||| | Sbjct 590688 TGACGTTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAATAGTCTTGCCGGTGAGGG 590747 Query 152086 TCTTCACGAAGACCTGCAT 152104 |||||||||||| ||||| Sbjct 590748 TCTTCACGAAGATTTGCAT 590766 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | || ||||| || || || ||||||||||| |||| || || | |||||| Sbjct 590783 AGGACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCT 590842 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| | | ||||||||| | | ||| || ||||| || Sbjct 590843 TCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCC 590902 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| | || | ||||||| ||| || || | || || || Sbjct 590903 TGGATCTTGGTCTTAACATTGTCGATAGTGTCTGATGACTCAACCTCCAAGGTGATGGTC 590962 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| | |||||| ||||||| |||||| Sbjct 590963 TTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 590994 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || || || ||||| || ||||||||||| || | | |||| Sbjct 591004 GAGGCGGAGGACGAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTTCG 591063 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || ||||||||||| | | ||||||||| | | |||||| || Sbjct 591064 GCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTC 591123 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| |||||||| || ||||| | || | | |||| | ||| || ||||| || Sbjct 591124 CTTGTCTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAACCTCAAGGGT 591183 Query 152066 AATAGTTTTGCCCGT 152080 || || || || || Sbjct 591184 GATCGTCTTTCCGGT 591198 >seq265 Length=369171 Score = 89.7 bits (98), Expect = 1e-12 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||||| |||||| || || || || ||||| || ||||||||||| || | || || | Sbjct 48746 GAGTCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGATAGGGTGCG 48805 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || || ||||||||||| | | ||||||||| | | ||||||||| Sbjct 48806 TCCATCTTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATTCCTTC 48865 Query 152006 CTTTTCT 152012 ||| ||| Sbjct 48866 CTTGTCT 48872 >seq520 Length=276588 Score = 84.2 bits (92), Expect = 5e-11 Identities = 138/196 (70%), Gaps = 5/196 (3%) Strand=Plus/Plus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA--GGC 151959 |||| ||| | | | |||||||||||||| ||| || || | ||||| || | || Sbjct 100381 TGAAAAGTCG-CACCTTTTGGATGTTGTAGTCGCTCAAGGTACGTCCATCCTCCAATTGC 100439 Query 151960 TTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTT 152019 ||| || || ||||| | | ||| ||||| | || ||||| ||||| ||||| || | Sbjct 100440 TTT--CCAGCAAAGATTAATCGCTGTTGGTCTGGCGGAATTCCCTCCTTGTCTTGGATCT 100497 Query 152020 TTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCG 152079 | |||||| | || | |||| || ||| || ||||| || || || ||||||| Sbjct 100498 TGGTCTTGACATTGTCGATAGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCG 100557 Query 152080 TGAGAGTCTTCACGAA 152095 |||| || || ||||| Sbjct 100558 TGAGGGTTTTGACGAA 100573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153805425337840