Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq264 140 2e-28 seq520 86.0 5e-12 >seq264 Length=644297 Score = 140 bits (154), Expect = 2e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| | || |||||| ||||||||||| ||| | || | || || Sbjct 590557 CACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCCATCTTC 590616 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||| ||||| ||||| | ||||||||||||| ||| | ||||||||| ||| Sbjct 590617 CAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCTGGAGGAATACCTTCCTTGTCCTG 590676 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||| | | | |||||||| | |||||| || || | ||||| ||||| Sbjct 590677 GATCTTCGTCTTGACGTTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAATAGTCTT 590736 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||||||||||||||||||||||||| Sbjct 590737 GCCGGTGAGGGTCTTCACGAAGATTTGCAT 590766 Score = 118 bits (130), Expect = 8e-22 Identities = 156/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 |||| ||| || ||| ||||| ||||||||||| |||| | || | ||| | || || Sbjct 590786 ACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGT-GCGGCCATCTTC 590844 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| ||||| |||||||| |||||||| |||| || | ||| ||||| ||| Sbjct 590845 AAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTG 590904 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | || ||||| | || || ||||||| || || ||| Sbjct 590905 GATCTTGGTCTTAACATTGT--CGATAGTGTCTGATGACTCAACCTCCAAGGTGATGGTC 590962 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| | ||||| |||||||| ||||| Sbjct 590963 TTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 590994 Score = 95.1 bits (104), Expect = 9e-15 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| |||||| ||||||||||| || | ||| || | || || Sbjct 591014 ACGAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTTCGGCCATCCTCG 591073 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| |||||||| |||||||| |||| || | || ||||| || Sbjct 591074 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGA 591133 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | ||||||||| || || ||||| | || ||||||||| Sbjct 591134 ATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAACCTCAAGGGTGATCGTCTTT 591193 Query 44309 CCCGT 44313 || || Sbjct 591194 CCGGT 591198 >seq520 Length=276588 Score = 86.0 bits (94), Expect = 5e-12 Identities = 132/184 (72%), Gaps = 6/184 (3%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||||||||||||| ||| | || | || | || |||| ||||| || |||||| Sbjct 100393 CCTTTTGGATGTTGTAGTCGCTCAAGGTA-CGTCCATCCTCCAATTGCTTTCCAGCAAAG 100451 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATG 44264 || || ||||| || |||| || | || ||||| || ||||| ||| || || Sbjct 100452 ATTAATCGCTGTTGGTCTGGCGGAATTCCCTCCTTGTCTTGGATCTTGGTCTTGACATTG 100511 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 | | || ||||| | ||| || ||||| | || || ||||| ||||||||||| || | Sbjct 100512 T--CGATAGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTTTTGA 100569 Query 44325 CGAA 44328 |||| Sbjct 100570 CGAA 100573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359985837121680