Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq264 150 4e-31 seq265 93.3 1e-13 >seq264 Length=644297 Score = 150 bits (166), Expect = 4e-31 Identities = 157/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || ||||| || || || || || ||||| || ||| ||| ||| Sbjct 590763 CAAATCTTCGTGAAGACCCTCACCGGCAAGACTATTACACTCGAAGTTGAATCCTCTGAC 590704 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| ||||| || ||||| || ||||| Sbjct 590703 ACCATCGACAACGTCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGATCAGCAG 590644 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| ||| | ||||||||| | || | ||| || ||| || Sbjct 590643 CGCCTCATCTTCGCCGGAAAGCAGTTGGAAGATGGACGTACGTTGAGCGACTACAACATC 590584 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || |||| |||| Sbjct 590583 CAGAAGGAGTCGACCTTGCA-CTTG 590560 Score = 132 bits (146), Expect = 1e-25 Identities = 143/188 (76%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATCGAGAACGTCAAA 178001 || ||||| ||||||||||| ||||| || ||| ||||||||||| |||||||| Sbjct 591198 ACCGGAAAGACGATCACCCTTGAGGTTGAGTCTAGC---GACACCATCGACAACGTCAAG 591142 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 |||||||| ||||| || |||||||| || |||||||| || | ||||||||||| Sbjct 591141 ACCAAGATTCAAGACAAGGAGGGAATCCCACCAGACCAGCAGCGCTTGATCTTCGCCGGC 591082 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || |||||||| ||||| | || || | || || ||| |||| || || || ||||| Sbjct 591081 AAGCAGCTCGAGGATGGCCGAACCCTCTCAGACTACAACATCCAGAAGGAGTCCACACTC 591022 Query 178122 CATCTTGT 178129 || || || Sbjct 591021 CACCTCGT 591014 Score = 122 bits (134), Expect = 2e-22 Identities = 153/206 (74%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||| | || || || || |||||| | ||||| || |||||| Sbjct 590991 CAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACCTTGGAGGTTGAGTCATCAGAC 590932 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||| |||||||| || || ||||| || |||||||| Sbjct 590931 ACTATCGACAATGTTAAGACCAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAGCAG 590872 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | ||||||||||| || || || |||||||| | || |||| |||| || ||| | Sbjct 590871 CGCTTGATCTTCGCCGGCAAGCAACTTGAAGATGGCCGCAC-CTTGTCCGACTACAACAT 590813 Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128 ||| || ||||| || || || |||| Sbjct 590812 CCAGAAGGAATCCACTCTCCA-CTTG 590788 >seq265 Length=369171 Score = 93.3 bits (102), Expect = 1e-13 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| ||||||||||| || |||||||| || | ||||||||||| || ||||||||| Sbjct 48871 GACAAGGAAGGAATCCCCCCAGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAA 48812 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||||| | || || | || || ||| |||| || || || || || || || || Sbjct 48811 GATGGACGCACCCTATCGGACTACAACATCCAGAAGGAGTCGACCCTCCACCTCGT 48756 Score = 84.2 bits (92), Expect = 5e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || ||||| || || || ||||||||||||||||| ||| ||| Sbjct 49013 CAGATTTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCCTCCGAC 48954 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGG 178014 ||||| || || ||||| |||||||||| Sbjct 48953 ACCATTGACAATGTCAAGACCAAGATTCAGG 48923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203715160281760