Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1169 111 2e-19 >seq1169 Length=73998 Score = 111 bits (122), Expect = 2e-19 Identities = 192/277 (69%), Gaps = 9/277 (3%) Strand=Plus/Plus Query 17238 ACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATC 17297 |||| ||||| || ||| ||| | ||||| || ||||| |||||||| || ||||| | Sbjct 49169 ACGTCTCGATCAGGAGGGAGTATGTCTCGGAATGGATGTTTTCCATGGCGATTTGAAAAC 49228 Query 17298 CGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTT 17357 ||||||||||||||||||| | | |||||||| | || ||||| || || | Sbjct 49229 CGTAAAAGCATCGGGCTTCTGGAACCTGAACTTCGTTGCTAAAACGTTCGAGGAGGTTCT 49288 Query 17358 CGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTT 17417 |||| |||||||| || || |||||||| || | || || |||||| | || Sbjct 49289 CGTTGACGATGCCATCCGATGCTGCGAAAAATGCGAGAATGTGTGAGATGAAAAAGCGTT 49348 Query 17418 CGTCCGGTGTAAGAACGCG------CCAGTCCTTTAAATCTTTGGATATATCCACTTCTT 17471 ||| || || | ||| |||||| | |||||||| | ||| | |||| Sbjct 49349 CGT-CGTCGT--TCAGGCGGTTGTTCCAGTCTGGAACGTCTTTGGAGAGATCGATCTCTT 49405 Query 17472 CGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACAT 17508 ||| ||||||||| |||| |||||| || ||||| Sbjct 49406 CGGCGGTCCAAAATGAGGCCATTGCCTTCTTGTACAT 49442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517534731542400