Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1579 113 3e-20 >seq1579 Length=49950 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | ||||||| ||| || || || ||||| |||||||||||| | Sbjct 29012 CCGCCACGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTC 29071 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| | || ||||||||||| || ||||| ||||| ||||||||||| || Sbjct 29072 AGCGTACGTCCATCTTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGA 29131 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||||| ||||| ||| | | | | || | || | ||||| || Sbjct 29132 ATACCTTCCTTGTCCTGGATCTTCGTCTTGACGTTGTCGATGGTGTCAGAGGATTCAACT 29191 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || || || ||||||||||| || ||||| ||||| ||||| Sbjct 29192 TCTAGTGTAATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 29238 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || |||| ||| | ||| ||| ||||| ||||||||||||||| Sbjct 29240 CCACCGCGGAGACGTAGAACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAC 29299 Query 34223 -AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || || ||| | || || | |||||||| ||||| || | ||||||||||| || Sbjct 29300 AAGGTG-CGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGG 29358 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| ||||| ||| | || | | || | || | || || || Sbjct 29359 GATACCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCGATGGTGTCTGATGACTCAAC 29418 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| ||||| || | ||| || || ||||| ||||| Sbjct 29419 CTCCAAGGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATTTGCAT 29466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323065385100800