Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq196 98.7 1e-15 >seq196 Length=40614 Score = 98.7 bits (108), Expect = 1e-15 Identities = 342/528 (65%), Gaps = 7/528 (1%) Strand=Plus/Minus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 ||||| || ||||| || || || | | || || || ||||||||||| || || ||| Sbjct 20853 GTGAACTGGATGGGTGCTGAAGCAGCCATGGTTCGGAGGTAGTACATTCCAGTCTTGAGA 20794 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958 || | |||| || ||| ||||| || | ||| |||| ||| || Sbjct 20793 CCCATCTTCCAACCAGCAAAGTGCATGGAAGTAATCTTGCCCATGGTCGGCTCTTTCATG 20734 Query 64959 TGGATATTCATAGAT-TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 65017 || || |||| || | ||| |||||| |||||||| || | || |||||||| | || Sbjct 20733 TGAATGTTCA-AGCTCTGAGATTGATCAATGAAGGCGCCACGATCCGCAGCCATGGTGAT 20675 Query 65018 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 65077 || || || |||||||||| || || |||| ||| ||||| || |||| Sbjct 20674 AATGGTACGCTGGCTGATTTCCCAAACCGTCTTGTAAAGGGCCTTGATATCATCGGGAAT 20615 Query 65078 GTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATT 65134 || | | ||||| || || ||||| ||||| || || | |||||| || | || Sbjct 20614 ATTAGGAATGTTCTGGATAGAACCACCCTCTGCAATGATACGATTCTTCATGTTGTCCGA 20555 Query 65135 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 65194 ||| | ||||| | | || | || || || || || ||||| ||||| || Sbjct 20554 CCAAAGACCCATCTCGACGAGATCTTTGAGCAGCCATGGGTTGACGACTTGGAATTCCCC 20495 Query 65195 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCC 65254 || | || | |||| ||| ||||| || || || || | |||| || || Sbjct 20494 AGCAAGCACACGACGAGAGTAGATATTTGACGTGTATGGCTCGAAGCACTCGTTGAAACC 20435 Query 65255 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA-TTTCTAAGAC 65313 | |||||||| || || ||||| |||||||| | || ||| || | || | || || Sbjct 20434 GAGAATTTGAGATGTGGAAGCAGTTGGCATAGGAG-CAACAAGAAGTGAGTTGCGAATAC 20376 Query 65314 CGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 65361 ||| | |||| | | | || || | ||||| | ||| ||||||| Sbjct 20375 CGTGCTTCTTGATATCAGCCTTGAGCGAGTCCCAGTCCCAGAGATCCG 20328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658158978371200