Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq196 102 1e-16 seq1169 91.5 2e-13 >seq196 Length=40614 Score = 102 bits (112), Expect = 1e-16 Identities = 365/565 (65%), Gaps = 7/565 (1%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||| || ||||| || || || | | || || || ||||||||||| || || ||| Sbjct 20853 GTGAACTGGATGGGTGCTGAAGCAGCCATGGTTCGGAGGTAGTACATTCCAGTCTTGAGA 20794 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || | |||| || || ||||| || | ||| |||| ||| || Sbjct 20793 CCCATCTTCCAACCAGCAAAGTGCATGGAAGTAATCTTGCCCATGGTCGGCTCTTTCATG 20734 Query 78838 TGGATATTCATAGAT-TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 78896 || || |||| || | ||| |||||| |||||||| || | || |||||||| | || Sbjct 20733 TGAATGTTCA-AGCTCTGAGATTGATCAATGAAGGCGCCACGATCCGCAGCCATGGTGAT 20675 Query 78897 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 78956 || || || |||||||||| || || |||| ||| ||||| || |||| Sbjct 20674 AATGGTACGCTGGCTGATTTCCCAAACCGTCTTGTAAAGGGCCTTGATATCATCGGGAAT 20615 Query 78957 GTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATT 79013 || | | ||||| || || ||||| ||||| || || | |||||| || | || Sbjct 20614 ATTAGGAATGTTCTGGATAGAACCACCCTCTGCAATGATACGATTCTTCATGTTGTCCGA 20555 Query 79014 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073 ||| | ||||| | | || | || || || || || ||||| ||||| || Sbjct 20554 CCAAAGACCCATCTCGACGAGATCTTTGAGCAGCCATGGGTTGACGACTTGGAATTCCCC 20495 Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133 || | || | |||| ||| ||||| || ||||| || | | || || || Sbjct 20494 AGCAAGCACACGACGAGAGTAGATATTTGACGTGTATGGCTCGAAGCACTCGTTGAAACC 20435 Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA-TTTCTAAGAC 79192 | |||||||| || || || ||||||||||| | || ||| || | || | || || Sbjct 20434 GAGAATTTGAGATGTGGAAGCAGTTGGCATAGGAG-CAACAAGAAGTGAGTTGCGAATAC 20376 Query 79193 CGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACAT 79252 ||| |||| | | | || || || ||||| ||||| ||||| | || || | Sbjct 20375 CGTGCTTCTTGATATCAGCCTTGAGCGAGTCCCAGTCCCAGAGATCCGTAGGAGTGACGT 20316 Query 79253 TCCAAAGATCATATTGTAGAATACC 79277 |||| | || || || |||||||| Sbjct 20315 TCCACATGTCGTACTGGAGAATACC 20291 >seq1169 Length=73998 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| ||||| |||||||| | | || ||||||||||| || || | Sbjct 48843 CAGGCAAAGTCGGTGTGCATTCCCTCGTCGCGAGAGATAAGTTCGTTGGAGAAGGTCAAG 48902 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| || || ||||| || ||||| || || || ||||| | || |||||| Sbjct 48903 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATAGATGCAAAGGCGCCGCTGAAGAAG 48962 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCAT---GT 50136 || || || || || || || || || || | | | || | | | | |||||| Sbjct 48963 ATACCCTCGACAGCTGCGAATGCGACGAGACGCGATGCAAAGGTAGAGTTGTCATCGCAA 49022 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 |||||||| | ||||| ||||||||||| Sbjct 49023 ATCCACTTCAGTGCCCAGTCGGCCTTCTT 49051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718253716355200