Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31]
1,680 sequences; 40,142,277 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq1579 118 1e-21
seq1455 102 7e-17
>seq1579
Length=49950
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
|||||||||||| || || ||||| || | ||| || ||||||| || ||| ||
Sbjct 29029 CACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGTCCATCTTC 29088
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|| ||| |||||| | ||||| | | ||||| ||||||||||||||||| ||||| |
Sbjct 29089 CAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCTTCCTTGTCCTG 29148
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
|| || | ||||||| | ||| ||||||| | || || || | || || || ||
Sbjct 29149 GATCTTCGTCTTGACGTTGTCGATGGTGTCAGAGGATTCAACTTCTAGTGTAATAGTCTT 29208
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || ||||| ||||| |||||
Sbjct 29209 GCCGGTGAGGGTCTTCACGAAGATTTGCAT 29238
>seq1455
Length=38904
Score = 102 bits (112), Expect = 7e-17
Identities = 131/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 94818 CCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGA 94877
||||||| | ||| || ||||||| || |||||||| || ||||| ||||||
Sbjct 28531 CCTTTTGGATGTTGTAGTCGCTCAAGGTACGTCCATCCTCCAATTGCTTTCCAGCAAAGA 28590
Query 94878 TTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGC 94937
|||||| || || ||||| ||||| || || ||||| | || || | |||||| |
Sbjct 28591 TTAATCGCTGTTGGTCTGGCGGAATTCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGT 28650
Query 94938 CGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAA 94997
||| |||||||| | ||||| |||| |||||||| || || || || ||||| || |
Sbjct 28651 CGATAGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTTTTGACGA 28710
Query 94998 A 94998
|
Sbjct 28711 A 28711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448281785884800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |