Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1645 104 4e-18 seq668 100 4e-17 >seq1645 Length=17866 Score = 104 bits (114), Expect = 4e-18 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| ||| ||| || || ||||||||||||||||| |||||||| || Sbjct 11618 GCCAAGCGCCACCGCAAGAT-TCTCCGTGACAACATCCAAGGAATCACGAAGCCAGCCAT 11676 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||||||||| ||||||||||| || || |||||| | |||| Sbjct 11677 CCGTCGTCTCGCTCGTCGTGGCGGTGTGAAGCGTATTTCTG 11717 >seq668 Length=23702 Score = 100 bits (110), Expect = 4e-17 Identities = 83/99 (84%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||| |||||| || |||||||| || ||||||||||| || || Sbjct 5412 GCCAAGCGCCACCGAAAGAT-TCTTCGCGACAACATCCAGGGTATCACCAAGCCTGCCAT 5470 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 |||||||| |||||||||||||| ||||||||| |||| Sbjct 5471 TCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 5509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073663964240