Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq196 129 7e-25 seq1169 82.4 1e-10 >seq196 Length=40614 Score = 129 bits (142), Expect = 7e-25 Identities = 596/936 (64%), Gaps = 10/936 (1%) Strand=Plus/Minus Query 63137 TTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGA 63196 |||||||||||| || | | || | | | ||||| || || | || ||||| | | Sbjct 19654 TTCGAACTCGTCACCGTAGATATCGGCAAGACCAGGGCACTCGTGAGGGCACATGAGAGT 19595 Query 63197 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 63255 ||| || || | | | || || ||||| || || || |||||||| | || ||| | Sbjct 19594 CCAGTCGCCATTCTGTTCGACGCGCTTCATGAACAGGTCGGGAATCCACA-AGGCATAGA 19536 Query 63256 ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 63315 | ||||| | | | ||| || || || |||||| | ||||| | | | Sbjct 19535 AAAGATCACGAGCACGCGCTTCTTCTTTGCCGTGGTTCTTTCTCAGATCTAACCAGTTGA 19476 Query 63316 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 63375 | ||| | ||||| || || | ||| ||||| | | ||||| || ||||| || | Sbjct 19475 AGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAATGCACCAGGACGCTTGTTGCCAC 19416 Query 63376 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTG 63435 | ||||| | ||| | ||| || | | | || | | ||| |||| || |||||| | Sbjct 19415 CTTGATCAACGTAGCGAGCAGTCGCGTCAAAGACACGGAGCATAGGAACAAGACCGTTCG 19356 Query 63436 ATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGAC 63495 || | || || || || || || |||| |||| || || | || || | Sbjct 19355 ATGTGCCGTTTGTTCCTCCAATGTATGATCCAGTGGCTCGGATGCGATGTATGTTAAGGC 19296 Query 63496 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCT 63555 | || || || || | || || || | || || || | ||||| |||||||||| Sbjct 19295 CGATACCACCAGCGGTCTTTGAAATCATAGCACAAGTCTTGAGGGTGTCGTAGATACCCT 19236 Query 63556 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 63615 | ||||| || || || ||| || || || || || | ||| | || || | Sbjct 19235 CGATGCTGTCCTCCTTCGTGTCAATGAGGAAGCAAGACGAGAGTTGCGGTTGAGGTGTGC 19176 Query 63616 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTGTAC 63674 | || || || | ||||| || |||||||| || |||| | ||| | |||| ||||| Sbjct 19175 CTGCGTTGAAAAGTGTAGGGGAGGCGTGCGTGAAGTATTTGTTAGACATGTAG-TTGTAT 19117 Query 63675 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63734 |||| || || || || || ||| | ||||| || ||||| |||||||| | ||| Sbjct 19116 GTCTGTATGGCAGATTCAATGTCCTCTCCGTGAATGCCGACTGCCACACGCATGATCATA 19057 Query 63735 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63794 || || || | ||| ||| |||| | ||||| | | ||| ||| |||| ||| Sbjct 19056 TGTTGTGGACGCTCAGCGACCTTGCCGCTTATTCGGAGTAGGTATGATCGCTCCAGAGTC 18997 Query 63795 TTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTT 63852 || || ||||| || | ||| ||||| |||| ||||| | ||| | ||||| | | Sbjct 18996 TTGAAGCCAAAGTATTGGTAATTGAAA--TCTCTGTCGTATACAATGGCAGAGTTCAACT 18939 Query 63853 TATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCC 63912 |||| || || | || | | ||||| ||||| || || | | || Sbjct 18938 CATCCGCATGCTTCATGACGGTCTTGTATGTGATGTCCGAAATCATAGGGCATTTCTTGT 18879 Query 63913 CATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttG 63972 || || || || | ||| | | | | || | || || || || | || || | Sbjct 18878 TGTTCTTTGGGTTGATATAATCGTAGAGGTCTTGGATGACAGCAGAGAACTGCTTCTTGG 18819 Query 63973 TTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTT 64032 ||| |||||| ||||| |||||||| || | || || || || || || || ||||| | Sbjct 18818 TTTGCTTGTGAAGATTCGATACGGCGATACGTGCTGCAAGGATTGCGTAGTCGGGATG-T 18760 Query 64033 GTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGA 64067 ||| | || || |||||| | || || ||| || Sbjct 18759 GTGACGGTCATGTACGCTGCTGTCTCAGCGGCCTGA 18724 Score = 98.7 bits (108), Expect = 1e-15 Identities = 342/528 (65%), Gaps = 7/528 (1%) Strand=Plus/Minus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 ||||| || ||||| || || || | | || || || ||||||||||| || || ||| Sbjct 20853 GTGAACTGGATGGGTGCTGAAGCAGCCATGGTTCGGAGGTAGTACATTCCAGTCTTGAGA 20794 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || | |||| || ||| ||||| || | ||| |||| ||| || Sbjct 20793 CCCATCTTCCAACCAGCAAAGTGCATGGAAGTAATCTTGCCCATGGTCGGCTCTTTCATG 20734 Query 62115 TGGATATTCATAGAT-TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62173 || || |||| || | ||| |||||| |||||||| || | || |||||||| | || Sbjct 20733 TGAATGTTCA-AGCTCTGAGATTGATCAATGAAGGCGCCACGATCCGCAGCCATGGTGAT 20675 Query 62174 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 62233 || || || |||||||||| || || |||| ||| ||||| || |||| Sbjct 20674 AATGGTACGCTGGCTGATTTCCCAAACCGTCTTGTAAAGGGCCTTGATATCATCGGGAAT 20615 Query 62234 GTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATT 62290 || | | ||||| || || ||||| ||||| || || | |||||| || | || Sbjct 20614 ATTAGGAATGTTCTGGATAGAACCACCCTCTGCAATGATACGATTCTTCATGTTGTCCGA 20555 Query 62291 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 62350 ||| | ||||| | | || | || || || || || ||||| ||||| || Sbjct 20554 CCAAAGACCCATCTCGACGAGATCTTTGAGCAGCCATGGGTTGACGACTTGGAATTCCCC 20495 Query 62351 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62410 || | || | |||| ||| ||||| || || || || | |||| || || Sbjct 20494 AGCAAGCACACGACGAGAGTAGATATTTGACGTGTATGGCTCGAAGCACTCGTTGAAACC 20435 Query 62411 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA-TTTCTAAGAC 62469 | |||||||| || || ||||| |||||||| | || ||| || | || | || || Sbjct 20434 GAGAATTTGAGATGTGGAAGCAGTTGGCATAGGAG-CAACAAGAAGTGAGTTGCGAATAC 20376 Query 62470 CGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 62517 ||| | |||| | | | || || | ||||| | ||| ||||||| Sbjct 20375 CGTGCTTCTTGATATCAGCCTTGAGCGAGTCCCAGTCCCAGAGATCCG 20328 >seq1169 Length=73998 Score = 82.4 bits (90), Expect = 1e-10 Identities = 174/258 (67%), Gaps = 5/258 (2%) Strand=Plus/Plus Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660 || ||||| |||||||| ||||| || ||||| ||||| || |||| || || | || | Sbjct 49195 TCGGAATGGATGTTTTCCATGGCGATTTGAAAACCGTAAAAGCATCGGGCTTCTGGAACC 49254 Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720 || ||||| | | ||| ||||| | || || || || || || || ||||| Sbjct 49255 TGAACTTCGTTGCTAAAACGTTCGAGGAGGTTCTCGTTGACGATGCCATCCGATGCTGCG 49314 Query 33721 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA----GTTTATTCCA 33776 ||||| || | | ||| || ||| | |||||| | ||| | || ||||| Sbjct 49315 AAAAATGCGAGAATGTGTGAGATGAAAAAGCGTTCGTC-GTCGTTCAGGCGGTTGTTCCA 49373 Query 33777 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33836 || | ||||| || | ||| | ||||| | ||||||||||| ||| |||||| Sbjct 49374 GTCTGGAACGTCTTTGGAGAGATCGATCTCTTCGGCGGTCCAAAATGAGGCCATTGCCTT 49433 Query 33837 TTTATACATGTTCCAGAT 33854 || |||||| |||||| Sbjct 49434 CTTGTACATGCGCCAGAT 49451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622934118108800