Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq196 239 1e-57 >seq196 Length=40614 Score = 239 bits (264), Expect = 1e-57 Identities = 1154/1822 (63%), Gaps = 76/1822 (4%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459 ||||| ||||| ||| |||||| || || | || | | | ||| || || || Sbjct 18995 AAGACTCTGGAGCGATCATACCTACTCCGAATAAGCGGCAAGGTCGCTGAGCGTCCACAA 19054 Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519 |||||| | |||||||| || | || || || | ||| |||| | || || | Sbjct 19055 CATATGATCATGCGTGTGGCAGTCGGCATTCACGGAGAGGACATTGAATCTGCCATACAG 19114 Query 363520 ACATATAAGCTTCTAAGTGCT--CGTGTA-TTCACGCACGCCACGCCAACAATGTACAAT 363576 ||||| || || | | || || | || |||||||||||| | || ||| | | ||| Sbjct 19115 ACATACAA-CTAC-ATGT-CTAACAAATACTTCACGCACGCCTCCCCTACACTTTTCAAC 19171 Query 363577 GCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCC 363636 || || || | | | || || | || |||||||| || | | | |||||| || | Sbjct 19172 GCAGGCACACCTCAACCGCAACTCTCGTCTTGCTTCCTCATTGACACGAAGGAGGACAGC 19231 Query 363637 ATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGA 363696 ||||||||||||| ||||| || |||| ||||||| | ||||| |||| || || || Sbjct 19232 ATCGAGGGTATCTACGACACCCTCAAGACTTGTGCTATGATTTCAAAGACCGCTGGTGGT 19291 Query 363697 ATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAA-CAGTTACATTCGCGGCACAGGGG 363754 || || | || || | || || || | | || |||||| | || ||| | Sbjct 19292 ATCGGCCTTAACATACATCGCATCCGAGCCACTGGATCA--TACATTGGAGGAACAAACG 19349 Query 363755 GATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCG 363814 | ||||| || || ||||| ||||| ||||| |||||| ||||| | ||||| | Sbjct 19350 GCACATCGAACGGTCTTGTTCCTATGCTCCGTGTCTTTGACGCGACTGCTCGCTACGTTG 19409 Query 363815 ACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCG 363874 | || ||||| ||||| || || || || || || |||||||| || |||| Sbjct 19410 ATCAAGGTGGCAACAAGCGTCCTGGTGCATTCGCCATCTACCTCGAGCCATGGCACGCCG 19469 Query 363875 ATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTG 363934 || | || | | | || || | || ||| || ||||| ||| |||||| |||| Sbjct 19470 ATGTCTTCAACTGGTTAGATCTGAGAAAGAACCACGGCAAAGAAGAAGCGCGTGCTCGTG 19529 Query 363935 ATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGA 363994 |||| |||||||| | ||| || | |||| || ||||||||||| || ||| | Sbjct 19530 ATCTTTTCTATGCCTTGTGGATTCCCGACCTGTTCATGAAGCGCGTCGAA-CAGAATGGC 19588 Query 363995 -ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGAC 364053 | ||| | ||| | ||||| ||||| || || |||||| ||||| | | |||||||| Sbjct 19589 GACTGGACTCTCATGTGCCCTCACGAGTGCCCTGGTCTTGCCGATATCTACGGTGACGAG 19648 Query 364054 TATGTTGCTCTATACGAAAAGTATG-------------------------------AATC 364082 | | ||||| ||||| ||||| | || | Sbjct 19649 TTCGAAGCTCTCTACGAGAAGTAAGTTGCCACAAGTGCTTGACTACCGCCAATACTAACC 19708 Query 364083 GG----AGGGA--------AAGGCT-----CGTAAGACAATTCCCGCACAGAAGCTATGG 364125 | ||| | ||||| ||| | || || | || || ||||| ||| Sbjct 19709 GCTCCCAGGTACGAGAAAGAAGGCCGTGGCCGTGAAACTATCCGTGCCCAAAAGCTCTGG 19768 Query 364126 TTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTAT-ATGTTGTACAAAGATTC 364184 | ||||| | | | |||| ||||| || | ||||| | ||| | ||||||||| | Sbjct 19769 TACGCCATTCTTCAAGCCCAGACCGAGACTGGCA-ACCCTTTCATGCTTTACAAAGATGC 19827 Query 364185 GTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTA 364243 |||||||||||| ||| ||| || || | || || |||| |||| | || || || | Sbjct 19828 TTGCAACCGCAAGAGCAATCAGAAGAACTTGGGAACCATTC-GCAGCTCCAATCTGTGCA 19886 Query 364244 CCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCG 364303 | ||||| ||||| ||| | || || || ||| ||| || || ||| | || || || | Sbjct 19887 CTGAGATCATTGAGTACTCTGCGCCTGATGAGGTTGCTGTTTGCAACTTGGCATCCATGG 19946 Query 364304 CGCTTCCGGCGTTTGTAAAAGAT------GGTACTTTTGACCACCAGCATCTTTATGACG 364357 | | || | || || | | | || | ||| | | | | | || | Sbjct 19947 CTTTGCCAACCTTCGTTGACGTTCAACGCGGCGTCTATGATTTCAACAAGTTGCACGAAG 20006 Query 364358 TAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTC 364417 | | | || | | |||| | ||||| | || ||| || | ||||| ||| Sbjct 20007 TCGTCCAGACTGTCATTCGCAACTTGAACAAGATCATTGACGTCAACCACTATCCCGTTC 20066 Query 364418 CTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCG 364477 | ||||| | || ||||| || || | ||| ||||||||||||| || | Sbjct 20067 CCGAAGCATACAACAGCAACTCCCGTCACCGTCCCGTCGGTGTTGGTGTACAGGGTCTTG 20126 Query 364478 CTGACGTTTTTATGATGCTCAAGA--TGGCATTTGATTCGCCTGACGCTCGTGTTCTAAA 364535 |||| | ||| | ||||| || | || || || || || || || || Sbjct 20127 CTGATGCTTTCCT--TGCTCTTCGCCTGCCCTTCGAGTCTCCCGAGGCAAAGAAGCTCAA 20184 Query 364536 TAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAA 364595 | | ||||| || || || || |||||| |||| |||| || | | ||| | Sbjct 20185 CATTCAAATCTTCGAGACCATTTACCATGCCGCCTTGACCTCTTCCTGCAAGCTTGCACA 20244 Query 364596 A-ACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGT 364654 | | |||| | | ||| || || ||||| || || |||| ||||| | |||||| Sbjct 20245 AGAAGAAGGCACA-TACAAAACCTACGAGGGCTCTCCAGTTTCCCAGGGTATTCTCCAGT 20303 Query 364655 TTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACG 364714 || | ||||| ||||| || | | | ||| ||||||| |||| | | Sbjct 20304 ACGACATGTGGAACGTCACTCCTACGGATCTCTGGGACTGGGACTCGCTCAAGGCTGATA 20363 Query 364715 TTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTG 364774 | |||||||| |||| ||||||||| || || || || ||||| || ||||| || Sbjct 20364 TCAAGAAGCACGGTATTCGCAACTCACTTCTTGTTGCTCCTATGCCAACTGCTTCCACAT 20423 Query 364775 CACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCC 364834 | || || ||||| ||||||||||||||| || | || ||| | || || || | Sbjct 20424 CTCAAATTCTCGGTTTCAACGAGTGCTTCGAGCCATACACGTCAAATATCTACTCTCGTC 20483 Query 364835 GGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACC 364894 | || ||| | || ||||| | || || || | || |||| ||||| ||| Sbjct 20484 GTGTGCTTGCTGGGGAATTCCAAGTCGTCAACCCATGGCTGCTCAAAGATCTCGTCGAGA 20543 Query 364895 GCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGA 364954 || || ||| |||| ||||||||| |||||| || | ||||||| | |||| Sbjct 20544 TGGGTCTTTGGTCGGACAACATGAAGAATCGTATCATTGCAGAGGGTGGTTCTATCCAGA 20603 Query 364955 ACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCA 365014 ||||||| |||| || ||| | ||| | ||||||| || || |||||||| | Sbjct 20604 ACATTCCTAATATTCCCGATGATATCAAGGCCCTTTACAAGACGGTTTGGGAAATCAGCC 20663 Query 365015 TGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGT 365074 ||| || | || ||||| || ||||| || || || || ||| ||| | Sbjct 20664 AGCGTACCATTATCACCATGGCTGCGGATCGTGGCGCCTTCATTGATCAATCTCAGAGCT 20723 Query 365075 TTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGT 365134 | ||| | ||||| |||| ||| | |||| |||| |||||||| || || | Sbjct 20724 TGAACATTCACATGAAAGAGCCGACCATGGGCAAGATTACTTCCATGCACTTTGCTGGTT 20783 Query 365135 GGAAATCCGGTCTTAAGACAGG 365156 |||| ||||| ||||| || Sbjct 20784 GGAAGATGGGTCTCAAGACTGG 20805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303325545313760