Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1579 107 5e-18 >seq1579 Length=49950 Score = 107 bits (118), Expect = 5e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | || | ||| ||| || ||||| || ||||||| Sbjct 29240 CCACCGCGGAGACGTAGAACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAC 29299 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || ||||| | ||| || || |||||||||| ||||| || |||| Sbjct 29300 AAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGG 29359 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || || || || || | || || || || Sbjct 29360 ATACCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCGATGGTGTCTGATGACTCAACC 29419 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| ||||| || |||| |||||||||||| || ||||| Sbjct 29420 TCCAAGGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATTTGCAT 29466 Score = 100 bits (110), Expect = 7e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || |||| ||| || || ||||| || ||||||| | Sbjct 29468 CCACCACGGAGGCGGAGGACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAG 29527 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || |||||||||| ||||| || |||| Sbjct 29528 AGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGG 29587 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || || || || || || | || ||||| || || | ||||| || || || Sbjct 29588 ATTCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAACC 29647 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCA 288451 || || ||||||||||| || |||| Sbjct 29648 TCAAGGGTGATCGTCTTTCCTGTCA 29672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179629007939040