Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31]
1,680 sequences; 40,142,277 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq1579 96.9 4e-15
>seq1579
Length=49950
Score = 96.9 bits (106), Expect = 4e-15
Identities = 153/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | |||||| ||||| || |||||| || || ||||| || ||| || || |
Sbjct 29023 ACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGTCC 29082
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || | |||||| || ||||| ||||| ||||||||||| | || | | |||||
Sbjct 29083 ATCTTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCTTCCTT 29142
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171
|||| ||| || |||| ||| | | | ||||| ||||| || || | || |
Sbjct 29143 GTCCTGGATCTTCGTCTTGA-CGTTGTCGATGGTGTCAGAGGATTCAACTTCTAGTGTAA 29201
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || ||||| || || ||||| || |||||||||||
Sbjct 29202 TAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 29238
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
||||| || | ||| ||||| || || ||||| || | || || || | || ||
Sbjct 29258 ACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCTTCG 29317
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|| ||||| || ||||| || | ||||||||||| | ||| | | |||||||||| |
Sbjct 29318 AGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGG 29377
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179
|| || |||| | | | ||||| || || || || | |||||||| |||
Sbjct 29378 ATCTTGGTCTTGACATTGTCGATGGTGTCTGATGACTCAACCTCCAAGGTGATGGTCTTG 29437
Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||| | ||||| || |||||||||||
Sbjct 29438 CCCGTCAAAGTCTTGACGAAGATTTGCAT 29466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543201392531200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |