Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1579 98.7 1e-15 seq537 84.2 2e-11 >seq1579 Length=49950 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || |||||||| || | || || | ||||| | |||||| ||| Sbjct 29042 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGTCCATCTTCCAACTGCTTTCCG 29101 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||||||||| |||||||| ||||| || || || || || ||| Sbjct 29102 GCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTCGTCTTG 29161 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || ||| || || ||||||| || | ||||||||||| | || Sbjct 29162 ACGTTGTCGATGGTGTCAGAGGATTCAACTTCTAGTGTAATAGTCTTGCCGGTGAGGGTC 29221 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| |||||||| Sbjct 29222 TTCACGAAGATTTGCAT 29238 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || || |||||||| || | | |||||| | ||||| || ||||||||| Sbjct 29270 GTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCTTCGAGTTGCTTGCCG 29329 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || | ||||||||||| || || || || || || || || || || ||| Sbjct 29330 GCGAAGATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTGGTCTTG 29389 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || | || || || | || | ||||||||| |||||||| Sbjct 29390 ACATTGTCGATGGTGTCTGATGACTCAACCTCCAAGGTGATGGTCTTGCCCGTCAAAGTC 29449 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| |||||||| Sbjct 29450 TTGACGAAGATTTGCAT 29466 >seq537 Length=52655 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || || || || || | ||||| || || || |||||||| || | Sbjct 29331 ACCACCACGGAGTCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 29390 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | ||||| |||||||||||||| | || | ||||||||||| || || Sbjct 29391 TAGGGTGCGTCCATCTTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGG 29450 Query 64336 AATTCCTTCTTTTTCT 64351 |||||||| || ||| Sbjct 29451 GATTCCTTCCTTGTCT 29466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499634307459200