Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq196 158 1e-33 >seq196 Length=40614 Score = 158 bits (174), Expect = 1e-33 Identities = 435/662 (66%), Gaps = 6/662 (1%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 |||||| | ||||||| |||||| ||||||||| || ||||| ||| || ||| Sbjct 18974 AATTACCAATACTTTGGCTTCAAGACTCTGGAGCGATCATACCTACTCCGAATAAGCGGC 19033 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | ||| | ||||| || || || || | ||||| || || |||| |||||||| | Sbjct 19034 AAGGTCGCTGAGCGTCCACAACATATGATCATGCGTGTGGCAGTCGGCATTCACGGAGAG 19093 Query 93835 GACATGCCGAATGTTT--TGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGG 93892 ||||| |||| | | | | | | || ||||| |||| | || | Sbjct 19094 GACATT--GAATCTGCCATACAGACATACAACTACATGTCTAACAAATACTTCACGCACG 19151 Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 || |||| || || |||||||| || || || || || | || || || ||||| | Sbjct 19152 CCTCCCCTACACTTTTCAACGCAGGCACACCTCAACCGCAACTCTCGTCTTGCTTCCTCA 19211 Query 93953 T-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | ||| | |||| ||| |||| || || | ||||| ||||||| ||||| | Sbjct 19212 TTGAC-ACGAAGGAGGACAGCATCGAGGGTATCTACGACACCCTCAAGACTTGTGCTATG 19270 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 || ||||| ||| || || ||||| | | | || | | || |||| || || Sbjct 19271 ATTTCAAAGACCGCTGGTGGTATCGGCCTTAACATACATCGCATCCGAGCCACTGGATCA 19330 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 ||||| | || || || ||||| || ||||| || || ||||||||||| ||||| || Sbjct 19331 TACATTGGAGGAACAAACGGCACATCGAACGGTCTTGTTCCTATGCTCCGTGTCTTTGAC 19390 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 | || |||||||| || || ||||| | | | ||| | ||||| |||| Sbjct 19391 GCGACTGCTCGCTACGTTGATCAAGGTGGCAACAAGCGTCCTGGTGCATTCGCCATCTAC 19450 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 |||||||| |||||||| || || | | || ||| |||||||||||||||| Sbjct 19451 CTCGAGCCATGGCACGCCGATGTCTTCAACTGGTTAGATCTGAGAAAGAACCACGGCAAA 19510 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || | | | || | || || ||||| || | ||| | || ||||| || ||||| Sbjct 19511 GAAGAAGCGCGTGCTCGTGATCTTTTCTATGCCTTGTGGATTCCCGACCTGTTCATGAAG 19570 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 |||||||| | || || ||||| ||| | || || | || || || || || || Sbjct 19571 CGCGTCGAACAGAATGGCGACTGGACTCTCATGTGCCCTCACGAGTGCCCTGGTCTTGCC 19630 Query 94372 GA 94373 || Sbjct 19631 GA 19632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494712810812800