Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1579 93.3 3e-14 >seq1579 Length=49950 Score = 93.3 bits (102), Expect = 3e-14 Identities = 151/215 (70%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | ||| ||| ||||| ||||| ||||| || | | | || |||| || Sbjct 29257 AACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCTTC 29316 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || || || ||||| || || | || ||||||||| | || | ||||||||||| Sbjct 29317 GAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTG 29376 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| ||||| || | ||||| || | |||||| || | ||| |||| Sbjct 29377 GATCTTGGTCTTGAC--AT--TGTCGATGGTGTCTGATGACTCAACCTCCAAGGTGATGG 29432 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || ||||| | |||||| || ||||| |||||| Sbjct 29433 TCTTGCCCGTCAAAGTCTTGACGAAGATTTGCATA 29467 Score = 86.0 bits (94), Expect = 4e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| |||| || ||||| ||||| ||||| || ||| |||| |||| || ||||| Sbjct 29491 GTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTG 29550 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || ||||| || || | || ||||||||| | || | ||||||||||| |||||| Sbjct 29551 CTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGAATCTT 29610 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 |||||| | || | || | | |||||| || | ||| || || ||||| || Sbjct 29611 GGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAACCTCAAGGGTGATCGTCTTTCCTGT 29670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324626953127040