Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1169 116 7e-21 >seq1169 Length=73998 Score = 116 bits (128), Expect = 7e-21 Identities = 343/519 (66%), Gaps = 15/519 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| || ||||| ||||| || | | || |||||||| Sbjct 48554 CTGGTAATCACCGACGCGCTTCTCGAAAAAGTTAGTCTTTCCGGCAAGAGATATGTTCTC 48613 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| |||||||||| | ||| || ||| || || ||| | | || | Sbjct 48614 CATGAAGTCGAAGGGGTTGACGGCGTTGTAAACCT-TGACATTGCCAAGCGCAAGCAAGA 48672 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | |||| || || |||||||||| | |||||||||| ||||||||| ||| Sbjct 48673 GACGATCAGCAACAAACTCGATGTACTGGCACATGAGGGTAGAGTTCATGCC---GAGCA 48729 Query 48018 A----CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 | ||||| || || | | | || |||| ||| || || || || || | Sbjct 48730 ATCTGCACGGT-AATGCTTCGCTCAAGAATTCCTGCTCAATTTGTACTGCCTCGGTGATG 48788 Query 48074 ATCT-GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132 || || | || | | || || || ||| || || || | |||| | ||| Sbjct 48789 ATGGCGCGGACGGCTTCAGGC-GAAGGCTTCTTGTTGAGCTG--TGAGA-AGAGGAGGCA 48844 Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192 ||||||||| |||||| || ||||| || ||| || ||||||||||| | || Sbjct 48845 GGCAAAGTCGGTGTGCATTCCCTCGTCGCGAGAGATAAGTTCGTTGGAGAAGGTCAAGCC 48904 Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252 ||||||| || | || ||||||||||| || | || || | ||| ||||||||| Sbjct 48905 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATAGATGCAAAGGCGCCGCTGAAGAAGAT 48964 Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312 ||||| || || ||||| ||| ||| | | | | || | || ||| | || | || Sbjct 48965 ACCCTCGACAGCTGCGAATGCGACGAGACGCGATGCAAAGGTAGAGTTGTCATCGCAAAT 49024 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||| || |||||||| |||||||| |||||| || Sbjct 49025 CCACTTCAGTGCCCAGTCGGCCTTCTTGCGGATGCAGGG 49063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931513237811200