Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq193 131 2e-25 >seq193 Length=24228 Score = 131 bits (144), Expect = 2e-25 Identities = 144/190 (76%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 138162 AATGGTGTGAGATGTT--TTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCAT 138219 || || |||||||||| ||| |||||||| ||||| || || |||||||||||||| | Sbjct 21076 AAGGGCGTGAGATGTTCCTTG--ACACCAATTGGACCGACACCTGGACCTCCACCTCCGT 21133 Query 138220 GTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATG 138279 | || |||||||||||||| || || |||||||| || ||||| |||||| |||| | Sbjct 21134 GAGGGATACAGAATGTCTTGTGCAAGTTTAGATGGCAAACATCGGCACCAATCTCACCAG 21193 Query 138280 GTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCAT 138339 || ||||| | || || || | ||||||||||| | || ||||||||||| | Sbjct 21194 GTGAGCAAAGACCAATTTGGGCGTTCACGTTTGCACCATCCATGTAAACCTGACCACCGT 21253 Query 138340 TGTCATGAAC 138349 | |||||| Sbjct 21254 ATTGATGAAC 21263 Score = 109 bits (120), Expect = 6e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 139298 CATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAAT 139357 ||| || || || || ||||| || || |||||||||||||| || || || | || ||| Sbjct 22266 CATGTTGGCCAGAAGCGCTTGCGCAGTACAGATGTTACTGGTCGCCTTCTCACGTCGAAT 22325 Query 139358 ATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGA 139417 ||||||||| | ||| || || || | || |||||||| || |||||| ||| Sbjct 22326 ATGCTGCTCGCGAGTCTGAAGAGCCAGCCTCGCGGCAGGATTTCCAAGCCTGTCCTTTGA 22385 Query 139418 CTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGC 139477 | ||| | | | ||||| ||||| | ||||| |||||| | ||||| ||||| || Sbjct 22386 CAAACCAATCAAACGACCAGGAATCTTGCGCTTATGCTTGTCGCTCGTTGCGAAGAAAGC 22445 Query 139478 AGCATGAGGACCTCC 139492 ||||| ||||| || Sbjct 22446 GGCATGTGGACCACC 22460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578986241033600