Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1455 96.9 7e-15 >seq1455 Length=38904 Score = 96.9 bits (106), Expect = 7e-15 Identities = 135/188 (72%), Gaps = 1/188 (1%) Strand=Plus/Plus Query 192334 TGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGT 192393 || ||||| || |||| | ||| || || || || || ||| |||| |||||||| Sbjct 28519 TGAAAAGTCGCACCTTTTG-GATGTTGTAGTCGCTCAAGGTACGTCCATCCTCCAATTGC 28577 Query 192394 TTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 192453 || |||||||||||||||| |||||| || || || ||||| || || ||||| || || Sbjct 28578 TTTCCAGCAAAGATTAATCGCTGTTGGTCTGGCGGAATTCCCTCCTTGTCTTGGATCTTG 28637 Query 192454 TTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 192513 | || ||||| |||| || || || || || || || || ||||| || || || Sbjct 28638 GTCTTGACATTGTCGATAGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTG 28697 Query 192514 AATGTTTT 192521 | ||||| Sbjct 28698 AGGGTTTT 28705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984458809068000