Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1579 87.8 4e-12 seq1455 84.2 4e-11 >seq1579 Length=49950 Score = 87.8 bits (96), Expect = 4e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | ||| || || || || ||||| || || || || || || ||| || Sbjct 29480 CGGAGGACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCA 29539 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || || || || ||||| | | || || ||||| || ||||| ||||| Sbjct 29540 TCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTG 29599 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||||||||| | || || || || || || || ||| || || || | || ||| Sbjct 29600 TCTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAACCTCAAGGGTGATC 29659 Query 82776 GTCTTGCCTGTCA 82788 ||||| ||||||| Sbjct 29660 GTCTTTCCTGTCA 29672 >seq1455 Length=38904 Score = 84.2 bits (92), Expect = 4e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || || || | ||| |||||||||||||||| || ||||| ||||| || ||||| ||| Sbjct 28563 CCATCCTCCAATTGCTTTCCAGCAAAGATTAATCGCTGTTGGTCTGGCGGAATTCCCTCC 28622 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 || ||||| ||||| | || ||||| || || || ||| | || || || | || Sbjct 28623 TTGTCTTGGATCTTGGTCTTGACATTGTCGATAGTGTCAGAGGACTCGACCTCAAGGGTG 28682 Query 82773 ATCGTCTTGCCTGT 82786 || |||||||| || Sbjct 28683 ATGGTCTTGCCCGT 28696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981806066169520