Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq196 125 1e-23 >seq196 Length=40614 Score = 125 bits (138), Expect = 1e-23 Identities = 416/637 (65%), Gaps = 10/637 (2%) Strand=Plus/Minus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATT 69653 || || ||||| || || ||||||||||| | || ||| || ||||| | | | Sbjct 19575 ACGCGCTTCATGAACAGGTCGGGAATCCACA-AGGCATAGAAAAGATCACGAGCACGCGC 19517 Query 69654 TTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 69713 |||||| || || || ||| | ||||| | | | | | ||| | |||||||| Sbjct 19516 TTCTTCTTTGCCGTGGTTCTTTCTCAGATCTAACCAGTTGAAGACATCGGCGTGCCATGG 19457 Query 69714 TTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGC 69773 || || || || || | | || || || || || || || ||||| | ||| | || Sbjct 19456 CTCGAGGTAGATGGCGAATGCACCAGGACGCTTGTTGCCACCTTGATCAACGTAGCGAGC 19397 Query 69774 AGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGA 69833 ||| | | |||| | ||||| |||| || ||| || ||| | || |||||||| Sbjct 19396 AGTCGCGTCAAAGACACGGAGCATAGGAACAAGACCGTTCGATGTGCCGTTTGTTCCTCC 19337 Query 69834 AATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTT 69893 ||| || ||| | || || || | || || || || || || || | || Sbjct 19336 AATGTATGATCCAGTGGCTCGGATGCGATGTATGTTAAGGCCGATACCACCAGCGGTCTT 19277 Query 69894 AGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCAT 69953 || || | ||||||| || | ||||| || |||||||| ||||| || || || | Sbjct 19276 TGAAATCATAGCACAAGTCTTGAGGGTGTCGTAGATACCCTCGATGCTGTCCTCCTTCGT 19217 Query 69954 GTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGG 70013 || || || || || || | ||| | || || || || || || | |||||| Sbjct 19216 GTCAATGAGGAAGCAAGACGAGAGTTGCGGTTGAGGTGTGCCTGCGTTGAAAAGTGTAGG 19157 Query 70014 AGATGCGTGAGTGAACCATTTTTCAGA-AAGCAGATTGTATGTTTCAATAGCTGATTCTA 70072 || ||||| ||||| |||| | ||| | | || |||||||| | || || ||||| | Sbjct 19156 GGAGGCGTGCGTGAAGTATTTGTTAGACATGTAG-TTGTATGTCTGTATGGCAGATTCAA 19098 Query 70073 TATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACC 70131 | ||| | | | ||||| || | || |||||||| | |||||| || || || || | Sbjct 19097 TGTCCTCTCCG-TGAATGCCGACTGCCACACGCATGATCATATGTTGTGGACGCTCAGCG 19039 Query 70132 GTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTG 70191 || ||||| | ||||||||| |||||||| || || ||||| || | | Sbjct 19038 ACCTTGCCGCTTATTCGGAGTAGGTATGATCGCTCCAGAGTCTTGAAGCCAAAGTATTGG 18979 Query 70192 TA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATT 70226 || ||||| ||||| ||||| | ||| |||| || Sbjct 18978 TAATTGAAA--TCTCTGTCGTATACAATGGCAGAGTT 18944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686894374915200