Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1579 120 3e-22 >seq1579 Length=49950 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || ||||||||| ||||||| || ||||| ||| | || Sbjct 29238 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACTATTACACTAGAAGTTGAATCCTCT 29179 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| ||||| || || || || || Sbjct 29178 GACACCATCGACAACGTCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAG 29119 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| || || |||||||| | || | ||| |||||| Sbjct 29118 CAGCGCCTCATCTTCGCCGGAAAGCAGTTGGAAGATGGACGTACGCTGAGCGACTACAAC 29059 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216 || || |||||||||||||| || ||||| | ||| | || || |||| Sbjct 29058 ATCCAGAAGGAGTCGACCTTGCACTTGGTGCTCCGTCTTCGTGGCGGCA 29010 Score = 82.4 bits (90), Expect = 7e-11 Identities = 123/175 (70%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069 |||| || ||| | || || ||||| || || | |||| | || || | ||||| Sbjct 29672 TGACAGGAAAGACGATCACCCTTGAGGTTGAGTCTAGCGACACCATCGACAACGTCAAGA 29613 Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129 || ||||||||||| || || || ||||| || || ||||| || || | |||||||| Sbjct 29612 CCAAGATTCAAGACAAGGAGGGAATCCCACCAGACCAGCAGCGCTTGATCTTCGCCGGCA 29553 Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGAC 27184 | || | || || | ||| | ||||| |||||||| || |||||||| || Sbjct 29552 AGCAGCTCGAGGATGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCCAC 29498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434909266713600