Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq1579 86.0 4e-12 >seq1579 Length=49950 Score = 86.0 bits (94), Expect = 4e-12 Identities = 160/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| || ||||| || || || || || ||||||| | || || ||| | | Sbjct 29238 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACTATTACACTAGAAGTTGAATCCTCT 29179 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || |||| ||||| || || ||||| |||||| |||| || | Sbjct 29178 GACACCATCGACAAC--GTCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGACC 29121 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || | || || |||||||| || ||||| || | ||| | || ||| |||| Sbjct 29120 AGCAGCGCCTCATCTTCGCCGGAAAGCAGTTGGAAGATGGACGTACGCTGAGCGACTACA 29061 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGCGAC 28020 ||||||| || ||| || ||||| ||||| | ||| | ||||||||| || Sbjct 29060 ACATCCAGAAGGAGTCGACCTTGCACTTGGTGCTCCGTCTTCGTGGCGGCAAC 29008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355855113717360