Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1169 104 2e-17 >seq1169 Length=73998 Score = 104 bits (114), Expect = 2e-17 Identities = 172/248 (69%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 4848 TCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACT 4907 || ||||| || ||||| || || || ||||| ||||||||||||| ||||||| || Sbjct 49195 TCGGAATGGATGTTTTCCATGGCGATTTGAAAACCGTAAAAGCATCGGGCTTCTGGAACC 49254 Query 4908 TGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCA 4967 ||||||||||| | ||| | ||| | | ||| ||||| || || || || ||||| Sbjct 49255 TGAACTTCGTTGCTAAAACGTTCGAGGAGGTTCTCGTTGACGATGCCATCCGATGCTGCG 49314 Query 4968 AAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAA---GTTTTTTCCAG 5024 ||||| || | || || || || || | ||||||| || | | || |||||| Sbjct 49315 AAAAATGCGAGAATGTGTGAGATGAAAAAGCGTTCGTCGTCGTTCAGGCGGTTGTTCCAG 49374 Query 5025 TGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTT 5084 | || | ||||| | | ||| | ||||| | |||||||| || || || || Sbjct 49375 TCTGGAACGTCTTTGGAGAGATCGATCTCTTCGGCGGTCCAAAATGAGGCCATTGCCTTC 49434 Query 5085 TTGTACAT 5092 |||||||| Sbjct 49435 TTGTACAT 49442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427040856159440