Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq196 165 1e-35 seq1169 86.0 9e-12 >seq196 Length=40614 Score = 165 bits (182), Expect = 1e-35 Identities = 449/683 (66%), Gaps = 6/683 (1%) Strand=Plus/Minus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 |||||||| || | |||||||| | | |||||| |||| | | || || ||||| Sbjct 19623 CCAGGGCACTCGTGAGGGCACATGAGAGTCCAGTCGCCATTCTGTTCGACGCGCTTCATG 19564 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 || || || || ||||| | ||| || ||||| || | | |||||| || || Sbjct 19563 AACAGGTCGGGAATCCACAAGGCATAGAAAAGATCACGAGCACGCGCTTCTTCTTTGCCG 19504 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 |||||| | ||||| | | | | | ||| | |||||||| || || || || Sbjct 19503 TGGTTCTTTCTCAGATCTAACCAGTTGAAGACATCGGCGTGCCATGGCTCGAGGTAGATG 19444 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | ||||| || || || || || ||||| | || | || || | | | Sbjct 19443 GCGAATGCACCAGGACGCTTGTTGCCACCTTGATCAACGTAGCGAGCAGTCGCGTCAAAG 19384 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 || | | ||| |||| || |||||| ||||| || |||||||| ||| || |||| Sbjct 19383 ACACGGAGCATAGGAACAAGACCGTTCGATGTGCCGTTTGTTCCTCCAATGTATGATCCA 19324 Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314 | || || || | ||| | || || || || || |||| || || | ||| Sbjct 19323 GTGGCTCGGATGCGATGTATGTTAAGGCCGATACCACCAGCGGTCTTTGAAATCATAGCA 19264 Query 78315 CAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAA 78374 ||| || | || |||||||||||||| || ||||| ||| || ||| || || || Sbjct 19263 CAAGTCTTGAGGGTGTCGTAGATACCCTCGATGCTGTCCTCCTTCGTGTCAATGAGGAAG 19204 Query 78375 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTA 78434 || || | ||| | ||| || ||||| || || | ||| || || || ||||| Sbjct 19203 CAAGACGAGAGTTGCGGTTGAGGTGTGCCTGCGTTGAAAAGTGTAGGGGAGGCGTGCGTG 19144 Query 78435 AACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATG 78493 || |||| | ||| | |||| |||||||| | || || ||||| |||||| | || Sbjct 19143 AAGTATTTGTTAGACATGTAG-TTGTATGTCTGTATGGCAGATTCAATGTCCTCTCCGTG 19085 Query 78494 AATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTAT 78553 ||| || || || |||||||| | |||||| || || | ||| | ||| |||| Sbjct 19084 AATGCCGACTGCCACACGCATGATCATATGTTGTGGACGCTCAGCGACCTTGCCGCTTAT 19025 Query 78554 TTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 78611 | | | ||||||| |||| ||| || || ||||| || | ||| ||||| ||| Sbjct 19024 TCGGAGTAGGTATGATCGCTCCAGAGTCTTGAAGCCAAAGTATTGGTAATTGAAA--TCT 18967 Query 78612 CTCTCGTAAATAATAACAGAATT 78634 || ||||| | ||| |||| || Sbjct 18966 CTGTCGTATACAATGGCAGAGTT 18944 Score = 109 bits (120), Expect = 8e-19 Identities = 376/582 (65%), Gaps = 16/582 (3%) Strand=Plus/Minus Query 76770 TTCTT-ATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACAT 76828 ||||| ||| | || ||||| || || | || || | | || || || |||||||| Sbjct 20866 TTCTTGATCGACAGTGAACTGGATGGGTGCTGAAGCAGCCATGGTTCGGAGGTAGTACAT 20807 Query 76829 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACT 76888 ||||| || ||||||| |||| || || |||||| || | ||| | Sbjct 20806 TCCAGTCTTGAGACCCATCTTCCAACCAGCAAAGTGCATGGAAGTAATCTTGC-----CC 20752 Query 76889 AGGATCGGCT-----ATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTA 76943 | | |||||| || ||||| |||| |||| |||||| ||||| || || | | Sbjct 20751 ATGGTCGGCTCTTTCATGTGAATGTTCAAGCTCTGAGATTGATCAATGAAGGCGCCACGA 20692 Query 76944 TCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGT 77003 || || ||||| | |||||||| || |||||||||| || ||| ||| Sbjct 20691 TCCGCAGCCATGGTGATAATGGTACGCTGGCTGATTTCCCAAACCGTCTTGTAAAGGGCC 20632 Query 77004 TTGATATCATCTGGAAGGTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTA 77060 ||||||||||| |||| || | | || || || |||||||| |||| || || | Sbjct 20631 TTGATATCATCGGGAATATTAGGAATGTTCTGGATAGAACCACCCTCTGCAATGATACGA 20572 Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTA 77120 ||||| || | || ||| | | |||| | | || | || || || || Sbjct 20571 TTCTTCATGTTGTCCGACCAAAGACCCATCTCGACGAGATCTTTGAGCAGCCATGGGTTG 20512 Query 77121 ACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 77180 || | ||| ||||| |||| | || | ||||| ||| ||||| || ||||| || Sbjct 20511 ACGACTTGGAATTCCCCAGCAAGCACACGACGAGAGTAGATATTTGACGTGTATGGCTCG 20452 Query 77181 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAAT 77240 | | || ||| || | |||||||| || ||||||||||||||||| | || ||| Sbjct 20451 AAGCACTCGTTGAAACCGAGAATTTGAGATGTGGAAGCAGTTGGCATAGGAG-CAACAAG 20393 Query 77241 AAACTA-TTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAG 77299 || | || | | ||| || | |||| | | | || || | | ||| ||||| || Sbjct 20392 AAGTGAGTTGCGAATACCGTGCTTCTTGATATCAGCCTTGAGCGAGTCCCAGTCCCAGAG 20333 Query 77300 ATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCC 77341 ||| | ||| || | ||| | ||||| || ||||| || Sbjct 20332 ATCCGTAGGAGTGACGTTCCACATGTCGTACTGGAGAATACC 20291 >seq1169 Length=73998 Score = 86.0 bits (94), Expect = 9e-12 Identities = 168/248 (68%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 48438 TCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATC 48497 ||||| || || ||||| || || || ||||| |||||||| |||| ||||||| | | Sbjct 49195 TCGGAATGGATGTTTTCCATGGCGATTTGAAAACCGTAAAAGCATCGGGCTTCTGGAACC 49254 Query 48498 TGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCA 48557 || || || | | ||| ||||| | ||||| || || || ||||| || || Sbjct 49255 TGAACTTCGTTGCTAAAACGTTCGAGGAGGTTCTCGTTGACGATGCCATCCGATGCTGCG 49314 Query 48558 AAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT---TTATTCCAG 48614 |||||||| | | ||| || ||| | ||||| | |||| || |||||| Sbjct 49315 AAAAATGCGAGAATGTGTGAGATGAAAAAGCGTTCGTCGTCGTTCAGGCGGTTGTTCCAG 49374 Query 48615 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTT 48674 || | ||||| || | ||| | ||||| || ||||||||||| ||| ||| || Sbjct 49375 TCTGGAACGTCTTTGGAGAGATCGATCTCTTCGGCGGTCCAAAATGAGGCCATTGCCTTC 49434 Query 48675 TTATACAT 48682 || ||||| Sbjct 49435 TTGTACAT 49442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694654211955200