Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq859 96.9 4e-15 >seq859 Length=478526 Score = 96.9 bits (106), Expect = 4e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| ||||| || |||||| || || ||||| || ||| || || | Sbjct 225982 ACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGTCC 225923 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || | |||||| || ||||| ||||| ||||||||||| | || | | ||||| Sbjct 225922 ATCTTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCTTCCTT 225863 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| || |||| ||| | | | ||||| ||||| || || | || | Sbjct 225862 GTCCTGGATCTTCGTCTTGA-CGTTGTCGATGGTGTCAGAGGATTCAACTTCTAGTGTAA 225804 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || ||||| || || ||||| || ||||||||||| Sbjct 225803 TAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 225767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571807500271640