Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq549 87.8 2e-12 >seq549 Length=285283 Score = 87.8 bits (96), Expect = 2e-12 Identities = 175/258 (68%), Gaps = 5/258 (2%) Strand=Plus/Plus Query 42362 TCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACC 42421 || ||||| |||||||| ||||| || ||||| ||||| || |||| ||| || | |||| Sbjct 207343 TCGGAATGGATGTTTTCCATGGCGATTTGAAAACCGTAAAAGCATCGGGCTTCTGGAACC 207402 Query 42422 TGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCA 42481 || ||||| | | ||| ||||| | || ||||| || || || || ||||| Sbjct 207403 TGAACTTCGTTGCTAAAACGTTCGAGGAGGTTCTCGTTGACGATGCCATCCGATGCTGCG 207462 Query 42482 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT----TTATTCCA 42537 ||||| || | | ||| || ||| | |||||| | ||| | || ||||| Sbjct 207463 AAAAATGCGAGAATGTGTGAGATGAAAAAGCGTTCGTC-GTCGTTCAGGCGGTTGTTCCA 207521 Query 42538 ATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTT 42597 || | ||||| || | ||| | ||||| | ||||||||||| || |||||| Sbjct 207522 GTCTGGAACGTCTTTGGAGAGATCGATCTCTTCGGCGGTCCAAAATGAGGCCATTGCCTT 207581 Query 42598 TTTATACATATTCCAGAT 42615 || ||||| |||||| Sbjct 207582 CTTGTACATGCGCCAGAT 207599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671127346003880