Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31]
1,413 sequences; 60,939,407 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq549 87.8 2e-12
>seq549
Length=285283
Score = 87.8 bits (96), Expect = 2e-12
Identities = 175/258 (68%), Gaps = 5/258 (2%)
Strand=Plus/Plus
Query 42362 TCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACC 42421
|| ||||| |||||||| ||||| || ||||| ||||| || |||| ||| || | ||||
Sbjct 207343 TCGGAATGGATGTTTTCCATGGCGATTTGAAAACCGTAAAAGCATCGGGCTTCTGGAACC 207402
Query 42422 TGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCA 42481
|| ||||| | | ||| ||||| | || ||||| || || || || |||||
Sbjct 207403 TGAACTTCGTTGCTAAAACGTTCGAGGAGGTTCTCGTTGACGATGCCATCCGATGCTGCG 207462
Query 42482 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT----TTATTCCA 42537
||||| || | | ||| || ||| | |||||| | ||| | || |||||
Sbjct 207463 AAAAATGCGAGAATGTGTGAGATGAAAAAGCGTTCGTC-GTCGTTCAGGCGGTTGTTCCA 207521
Query 42538 ATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTT 42597
|| | ||||| || | ||| | ||||| | ||||||||||| || ||||||
Sbjct 207522 GTCTGGAACGTCTTTGGAGAGATCGATCTCTTCGGCGGTCCAAAATGAGGCCATTGCCTT 207581
Query 42598 TTTATACATATTCCAGAT 42615
|| ||||| ||||||
Sbjct 207582 CTTGTACATGCGCCAGAT 207599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671127346003880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |