Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq549 136 8e-27 seq269 89.7 1e-12 >seq549 Length=285283 Score = 136 bits (150), Expect = 8e-27 Identities = 316/476 (66%), Gaps = 3/476 (1%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 ||||| || |||| ||| || | ||||| || ||||||||||||||||||||| | Sbjct 206724 TCGAAAAAGTTAGTCTTTCCGGCAAGAGATATGTTCTCCATGAAGTCGAAGGGGTTGACG 206783 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| |||| || |||||| || | |||| || || || |||||||| | Sbjct 206784 GCGTTGTAAACCTTGACATTGCCAAGCGCAAGCAAGAGACGATCAGCAACAAACTCGATG 206843 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | ||| || |||||||||||| | || | || || | ||| || | | | Sbjct 206844 TACTGGCACATGAGGGTAGAGTTCATGCCGAGCAATCTGCACGGTAATGCTTCGCTCAAG 206903 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAGC 251802 ||||||| || | |||||||| | || || || | | | || || Sbjct 206904 AATTCCTGCTCAATTTGTACTGCCTCGGTGATGATGGCGCGGACGGCTTCAGGCGAAGGC 206963 Query 251803 TTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCGA 251862 || || | |||| |||| | ||||| | |||| | ||||| |||||||||||| Sbjct 206964 TTCTTGTTGAGCTGTGAGAAGAGGAGGCAGGCAAAGTCGGTGTGCATTCCCTCGTCGCGA 207023 Query 251863 CTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAAG 251922 ||| | |||||||| | || ||| ||||| | || || ||| ||||||||||| Sbjct 207024 GAGATAAGTTCGTTGGAGAAGGTCAAGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAG 207083 Query 251923 ATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGCGC 251982 || | ||||| || ||| | | |||||||||| | |||| || || ||| Sbjct 207084 ATAGATGCAAAGGCGCCGCTGAAGAAGATACCCTCGACAGCTGCGAATGCGACGAGACGC 207143 Query 251983 TCAGCAAA---CGACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTTCTT 252035 ||||| || ||||| | | | ||||| ||||||| | |||||||| Sbjct 207144 GATGCAAAGGTAGAGTTGTCATCGCAAATCCACTTCAGTGCCCAGTCGGCCTTCTT 207199 >seq269 Length=145544 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755 || || ||||| || || |||||||| |||||||| || ||| | || || || | ||| Sbjct 134973 GTTGGCTCTCTCTCTGGAGGTTGGAAAATGAAGCTTGCGCTCGCCCGTGCTATGTTGCTG 135032 Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGA 279799 ||||||||||| || |||| || ||||| ||||||||| |||| Sbjct 135033 CGTGCCGATGTGCTCTTGCTCGACGAGCCTACCAACCACTTGGA 135076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027818191978333