Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq549 228 2e-54 seq782 145 1e-29 >seq549 Length=285283 Score = 228 bits (252), Expect = 2e-54 Identities = 374/524 (71%), Gaps = 25/524 (5%) Strand=Plus/Minus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATC-GAGAGTCCCGACGCAAC 42691 ||||||||| |||||||| |||||||| || || ||||| | || | | || | || Sbjct 207211 CCCTGCATCCGCAAGAAGGCCGACTGGGCACTGAAGTGGATTTGCGA-TGACAACTCTAC 207153 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | | | || || || || | || |||||||| ||||||||| |||||||| Sbjct 207152 CTTTGCATCGCGTCTCGTCGCATTCGCAGCTGTCGAGGGTATCTTCTTCAGCGGCGCCTT 207093 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810 || || ||||||||||||||| || ||| || |||||||| | |||||||| |||| Sbjct 207092 TGCATCTATCTTCTGGCTCAAGAAGCGCGGTCTC-ATGCCCGGCTTGACCTTCTCCAACG 207034 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 |||| ||| | |||||||| |||| | ||||||||||||||||| ||||| | Sbjct 207033 AACTTATCTCTCGCGACGAGGGAATGCACACCGACTTTGCCTGCCTCCTCTTCTC---AC 206977 Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930 | |||| | ||||| ||| || ||||| ||||||||||| ||||| || | | Sbjct 206976 AGCTCAACAAGAAGCCTTCGCCTGAAGCCGTCCGCGCCATCATCACCGAGGCAGTACAAA 206917 Query 42931 TCGAGAAGGAGTTCCTCA-CGCAGTCGCTGCCCGTG-TCCCTGGTCGGCATGAACCACGA 42988 | ||| |||| ||| | | || || | ||||| || ||||||||||| Sbjct 206916 TTGAGCAGGAATTCTTGAGCGAAG--CATTACCGTGCAGATTGCTCGGCATGAACTCTAC 206859 Query 42989 CCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTG--TGCCAGATGGG---T 43043 |||||||||| |||||||| ||| || || || | |||| || ||| | | || | Sbjct 206858 CCTCATGTGCCAGTACATCGAGTTTGTTGCTGATCGTCTCTTGCTTGC--GCTTGGCAAT 206801 Query 43044 CTCAGCCGCCTCTACAACACGCCGT--GCCCCTTCGACTTTATGGAGAACATCTCGTTGG 43101 ||| | |||| ||||||| |||||||||||| ||||||||||| || | | Sbjct 206800 GTCA---AGGTTTACA--ACGCCGTCAACCCCTTCGACTTCATGGAGAACATATCTCTTG 206746 Query 43102 AGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 || ||||| |||||||||||||||||||||| || |||||| Sbjct 206745 CCGGAAAGACTAACTTTTTCGAGAAGCGCGTCGGTGATTACCAG 206702 >seq782 Length=233898 Score = 145 bits (160), Expect = 1e-29 Identities = 352/530 (66%), Gaps = 10/530 (2%) Strand=Plus/Minus Query 244915 GTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCA 244974 ||| || || ||||||||| || ||| ||| | || || |||||| ||||| Sbjct 99945 GTAGAGAGCTTCGAACTCGTCACCGTAGATATCGGCAAGACCAGGGCACTCGTGAGGGCA 99886 Query 244975 CATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAG 245034 ||||||| |||| ||||| | | ||| | || |||||| |||||||| ||||| | Sbjct 99885 CATGAGAGTCCAGTCGCCATTCTGTTCGACGCGCTTCATGAACAGGTCGGGAATCCACAA 99826 Query 245035 GGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAA 245094 ||| | ||| || || | | | | || || ||| |||||| ||||| || || Sbjct 99825 GGCATAGAAAAGATCACGAGCACGCGCTTCTTCTTTGCCGTGGTTCTTTCTCAGATCTAA 99766 Query 245095 AAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTT 245154 ||| ||||| ||| ||||||| ||||| | ||||| |||| || || || ||||| Sbjct 99765 CCAGTTGAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAATGCACCAGGACGCTT 99706 Query 245155 GTTGCCTCCCTGGTCCACCATCCTCTCGAG----CGCGTTGAAGATGCGCAGGGTAGGCA 245210 |||||| || || | || | | |||| ||||| |||| || || |||| | Sbjct 99705 GTTGCCACCTTG----ATCAACGTAGCGAGCAGTCGCGTCAAAGACACGGAGCATAGGAA 99650 Query 245211 CTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGC 245270 | | ||||| || |||||| || || ||||| | || || | | || | | Sbjct 99649 CAAGACCGTTCGATGTGCCGTTTGTTCCTCCAATGTATGATCCAGTGGCTCGGATG-CGA 99591 Query 245271 TG-ATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTG 245329 || ||| | ||| | || || ||| ||| || || | || || |||||| |||| Sbjct 99590 TGTATGTTAAGGCCGATACCACCAGCGGTCTTTGAAATCATAGCACAAGTCTTGAGGGTG 99531 Query 245330 TCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGG 245389 || || ||||| ||||||||| |||| ||| | || ||||| || || || || Sbjct 99530 TCGTAGATACCCTCGATGCTGTCCTCCTTCGTGTCAATGAGGAAGCAAGACGAGAGTTGC 99471 Query 245390 GGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 || | || ||| | |||||| || || ||| |||||| || ||||| Sbjct 99470 GGTTGAGGTGTGCCTGCGTTGAAAAGTGTAGGGGAGGCGTGCGTGAAGTA 99421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944322520608880