Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq549 102 1e-16 seq413 82.4 9e-11 >seq549 Length=285283 Score = 102 bits (112), Expect = 1e-16 Identities = 160/226 (71%), Gaps = 10/226 (4%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | |||||||| || ||||| ||||| || |||||| || || Sbjct 206994 GCAAAGTCGGTGTGCATTCCCTCGTCGCGAGAGATAAGTTCGTTGGAGAAGGTCAAGCCG 207053 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||||||||| |||||||| | |||||| || | ||| | ||| ||||||||| Sbjct 207054 GGCATGAGACCGCGCTTCTTGAGCCAGAAGATAGATGCAAAGGCGCCGCTGAAGAAGATA 207113 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGG-AGCGGGACTTTGT-ATC-- 127695 ||||| ||| ||||| || | |||||| ||||||| || | |||| ||| Sbjct 207114 CCCTCGACAGCTGCGAATGCGACGAGACGCGATGCAAAGGTAGAG-----TTGTCATCGC 207168 Query 127696 -AAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGAC 127740 || |||||||| ||||| | ||||| || ||| || ||||| Sbjct 207169 AAATCCACTTCAGTGCCCAGTCGGCCTTCTTGCGGATGCAGGGGAC 207214 >seq413 Length=134486 Score = 82.4 bits (90), Expect = 9e-11 Identities = 163/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 12873 TTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGT-TGATTTTCACGGGCAAC 12931 || || | |||||| ||||| |||||||||| ||| || ||| || | ||| | || Sbjct 30986 TTCCCAATGGCGTCGATTTCATCAATGAAAATGATGCAAGGTGTGTTCTTC-CTCGCGGT 30928 Query 12932 TTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGC 12991 | || | |||||| || | | |||||||||||||||||||||||| || | | Sbjct 30927 GGCGAACAGATCTCGAACACGAGATGGACCGACACCCACAAACATCTCCACGAACTCAGA 30868 Query 12992 GGCG-GAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGG 13050 | || ||| | || ||| || || ||||| || || | ||| |||||| || | Sbjct 30867 GCCGCTCACACT-GAAGAATGGAACACCAGATTCGCCAGCTGTTGCTTTGGCGAGCAGCG 30809 Query 13051 TCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACCA 13106 |||| || || || || ||| | |||| |||||| || || ||| | |||||| Sbjct 30808 TCTTGCCAGTTCCAGGAGGCCCAGAAAGAATGGCACCGCGAGGAATCTTCGCACCA 30753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613496363929080