Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq859 141 1e-28 seq519 102 9e-17 >seq859 Length=478526 Score = 141 bits (156), Expect = 1e-28 Identities = 146/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||||||||| | ||||| | || ||||| |||||||||||||| Sbjct 225729 TCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAG 225670 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||||||||||||||| | || | | |||||||||| |||||| |||||| | Sbjct 225669 ATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACATTG 225610 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||| || || || |||| |||||||| |||||||||| || || || Sbjct 225609 TCGATGGTGTCTGATGACTCAACCTCCAAGGTGATGGTCTTGCCCGTCAAAGTCTTGACG 225550 Query 46583 AAGATTTGCAT 46593 ||||||||||| Sbjct 225549 AAGATTTGCAT 225539 Score = 122 bits (134), Expect = 1e-22 Identities = 131/171 (77%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || || || | || |||||||||||||||||||| Sbjct 225502 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAA 225443 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||||||||||||||| | || | | ||||||||| ||||| |||||| ||| Sbjct 225442 GATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGAATCTTGGTCTTGA-CGT 225384 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571 | | | |||||||| || || || || | ||||| || || || |||| Sbjct 225383 TGTCGATGGTGTCGCTGGACTCAACCTCAAGGGTGATCGTCTTTCCGGTCA 225333 Score = 116 bits (128), Expect = 4e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 46364 TTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCG 46423 ||||| || | | ||| | ||||| ||||| || |||||| ||||| ||||||||| Sbjct 225996 TTGCCGCCACGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCG 225937 Query 46424 GATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCC 46483 || || || | || || | |||||| |||||||| || | |||||||||||| | Sbjct 225936 CTCAGCGTACGTCCATCTTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGA 225877 Query 46484 GGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTC 46542 || | | ||||||||| ||||||| |||||| ||| | | | ||||| ||||| Sbjct 225876 GGAATACCTTCCTTGTCCTGGATCTTCGTCTTGA-CGTTGTCGATGGTGTCAGAGGATTC 225818 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | || || || ||||| || || || || || ||||||||||| Sbjct 225817 AACTTCTAGTGTAATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 225767 >seq519 Length=105584 Score = 102 bits (112), Expect = 9e-17 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| ||||| ||||| | || |||||||||||||||||||| Sbjct 89152 CTCCTTCTGGATGTTGTAGTCCGATAGGGTGCGTCCATCTTCGAGCTGCTTGCCGGCGAA 89211 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 ||||||||||||||||| | || | | |||||||| Sbjct 89212 GATCAAGCGCTGCTGGTCTGGGGGGATTCCTTCCTTGTC 89250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565228416476760