Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq859 260 2e-64 seq125 114 2e-20 seq782 105 8e-18 seq369 105 8e-18 >seq859 Length=478526 Score = 260 bits (288), Expect = 2e-64 Identities = 481/700 (69%), Gaps = 14/700 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| |||||||| |||||||| || || || || || | ||||| || |||||||| Sbjct 181530 TCGAAGTCTTCACCTCCCAAGTGGGTGTCACCAGCAGTGGACTTGACCTCGAAGATACCC 181589 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | || | || ||||| || || || ||||| || || || ||||| ||| Sbjct 181590 TCCTCAATGGTCAAAAGAGACACATCGAAGGTTCCTCCACCGAGATCGAAGATGAGGACG 181649 Query 7577 TTCGTATC----GTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 || || || | ||| ||| |||||||| || ||||| || || || || || Sbjct 181650 TTGCGCTCACCAGTGGCCTT----CTTGTCGAGACCATAAGCGATGGCAGCGGCTGTGGG 181705 Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 ||| || || |||||||| ||| || |||||||| | || || || || ||||| Sbjct 181706 TTCGTTGATGATACGAAGGACGTTGAGACCAGCAATGAGACCGGCGTCCTTTGTGGCTTG 181765 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 || ||||| ||||| ||||| || ||||| || ||||| |||| |||| | || Sbjct 181766 CCGCTGCGAGTCGTTGAAGTATGCTGGGACTGTGACGACGGCGTTGTTGACGGTACCTCC 181825 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGC 7812 ||| || ||||| ||| | || ||| ||||| | | ||| || || ||||| || | Sbjct 181826 GAGGTATGATTCAGCGGTCTCGCGCATCTTGGTCAAGATCATGGAGGAGATCTCCTCTGG 181885 Query 7813 CGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC 7872 | || || || || || || || |||| | | | || || ||| ||| Sbjct 181886 TGTGAAAGTCTTGGTCTCGCCCTTGAACTCAATCTGGACAACAGGCTTG-CCG-AGCTT- 181942 Query 7873 GGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTT 7932 | || | ||| | | | | |||||||| | ||||||| || | |||||| Sbjct 181943 GTCGACGATCTTGAAGGGGAAGTGCTTCATATCAGCCTGGACCTCAGCATCGGCAAACTT 182002 Query 7933 TCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTT 7992 | ||||| || ||||| ||||| || || ||||| |||||||||||| || || Sbjct 182003 GCGACCGATGAGGCGCTTGGCATCGAAGACAGTGTTGACGGGGTTCATGGCGACCTGATT 182062 Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 |||||||| ||| || || |||||||| || || || || || ||| | ||||| || Sbjct 182063 CTTCGCCGAGTCACCAATGAGACGTTCCGTA---TCTGTGAAGGCAACGAAGGATGGTGT 182119 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || || || || |||||||| ||||| ||||| | ||||| | | ||| || || Sbjct 182120 TGTGCGGTTACCCTGGTCGTTGGCAATGATTTCGATACGGTCATCTCTGAAGATACCCAC 182179 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGA 8152 ||| || ||||| || || ||||| |||||||| ||| || Sbjct 182180 GCAGGAGTACGTGGTACCCAAATCGATACCGATAGCTGGA 182219 >seq125 Length=153683 Score = 114 bits (126), Expect = 2e-20 Identities = 242/358 (68%), Gaps = 6/358 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||||||||| || || || ||||| | || ||||||| ||| Sbjct 62661 TCGAAATCCTCACCACCCAAGTGGGTGTCACCAGCGGTGGAGAGAACCTCAAAGACACCA 62602 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTC---AAAAATGAGT 7573 || | | | | |||||||| || || |||||||||| ||| | ||||| Sbjct 62601 GAGTCGACAGTGAGCGCGGAAACATCGAAGGTTCCACCACCCAAGTCGTACACAATGA-- 62544 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 | || || || || | | ||| || |||||||| || | ||| || || ||||| Sbjct 62543 TCTGGCG-CTCCTCCTCGCTCTGCTTGTCAAGACCGTAAGCCAAAGCGGCTGCGGTTGGC 62485 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || || | || ||| ||| ||| || || || || || | ||||| || || || Sbjct 62484 TCGTTGACAACACGGAGAACGTTAAGACCGGCGATGGTACCAGCATCCTTGGTGGCGGCA 62425 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 ||||| ||||| |||||||| ||||| ||||| || |||| ||| || | || Sbjct 62424 CGTTGGTTGTCGTTGAAGTAGGCGGGGACGGTTACAACGGCGTTGACGACCTTTTGTCCC 62365 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 | || || || |||| || |||||||| |||||||| | || || || |||| Sbjct 62364 AAGTAGGACTCAGCGACTTCCTTCATTTTCTGGAGAACCATAGCGGAGATTTCCTCAG 62307 >seq782 Length=233898 Score = 105 bits (116), Expect = 8e-18 Identities = 338/522 (65%), Gaps = 17/522 (3%) Strand=Plus/Minus Query 105466 TATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCCTGA 105525 || |||||||| ||| |||| ||||| | |||||| | || | |||||| || Sbjct 99953 TACTTCTCGTAGAGAGCTTCGAACTCGTCACCGTAGATATCGGCAAGACCAGGGCACTCG 99894 Query 105526 TCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGA 105585 | ||| || | | | ||| | |||| ||| ||||| |||||||||| || ||| Sbjct 99893 TGAGGGCACATGAGAGTCCAGTCGCCATTCTGTTCGACGCGCTTCATGAACAGGTCGGGA 99834 Query 105586 ATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGA 105645 ||||||| ||| | || || || ||| | ||| ||||| | || || ||| | Sbjct 99833 ATCCACAAGGCATAGAAAAGATCACGAGCACGCGCTTCTTCTTTGCCGTGGTTCTTTCTC 99774 Query 105646 ATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGC-AATAGACCC 105704 | || | | | || | ||||||||||||||| || | |||| || ||| ||| Sbjct 99773 AGATCTAACCAGTTGAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAATGCACC- 99715 Query 105705 TTTACGACGC------CCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAA 105758 | ||||| || |||||| || || | || || | || | | || || | Sbjct 99714 ---AGGACGCTTGTTGCCACCTTGATCAACGTAGCGAGCAGTCGCGTCAAAGACACGGAG 99658 Query 105759 CATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACG 105818 ||| |||| || ||| | ||||| || |||||||| | ||| | |||| | | || || Sbjct 99657 CATAGGAACAAGACCGTTCGATGTGCCGTTTGTTCCTCCAATGTATGATCCAGTGGCTCG 99598 Query 105819 TACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTT---ACTGATACGCGCACACTC 105875 | || | || | || ||||| ||||| ||| | | ||| ||||| Sbjct 99597 GATGCGATGTATGTTAAGGCCGATACCACCAGCGGTCTTTGAAATCATA---GCACAAGT 99541 Query 105876 TTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGA 105935 || | || ||||| ||||| ||||| || || ||||| | |||| ||||| || || Sbjct 99540 CTTGAGGGTGTCGTAGATACCCTCGATGCTGTCCTCCTTCGTGTCAATGAGGAAGCAAGA 99481 Query 105936 TGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGG 105977 || | ||| ||| ||||| || || ||||| || || || Sbjct 99480 CGAGAGTTGCGGTTGAGGTGTGCCTGCGTTGAAAAGTGTAGG 99439 >seq369 Length=136543 Score = 105 bits (116), Expect = 8e-18 Identities = 342/522 (66%), Gaps = 17/522 (3%) Strand=Plus/Minus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || || || ||||| |||||||| |||| | | || || |||||||| | | || Sbjct 30345 AGGTCTTCGAAACGGGCACGGGTGATGGTGGCAGTAAAGTCCTCGCCGTCGAAGAGGGAG 30286 Query 7304 TCAATTTCAATGGTTGTT--TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 || || || | ||| || || | || | || || || ||||| || || || || | Sbjct 30285 TCGATCTCGACGGTGGTGGATGAGGCGCTG--GACAAAGTACGCTTGGCACGTTCGCAAG 30228 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 | || ||||| | ||| || ||||| | | ||| || || || ||||| || || Sbjct 30227 CGGTACGTAACCTACGGAGAGCACGGGCATCACCAGAGATGTCCTTCTTGGTCTTTCGCG 30168 Query 7422 TAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 ||||| | |||||| |||| ||| | | |||||||| | ||||||||||||| Sbjct 30167 AGAACTCCTTCTTGAAGTGGTCGAGCAAGT-TGGTGTCGAAATCCTGACCACCCAAGTGT 30109 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 || || || || || || ||||| |||| ||| || | |||| | | || ||| Sbjct 30108 GTGTCACCAGCTGTGGCCTTGACAGTGAAGACACCGCCCTGGATGTGAAGAAGGGAGACA 30049 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT- 7599 || || || || ||||| || || | || | || || | | | ||| | ||| Sbjct 30048 TCGAAAGTTCCTCCACCGAGATCGTAGATCAACACATT--TCGCTCCTTCTCAG-ACTTA 29992 Query 7600 -----ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC-GAAGACA 7653 | |||||||||| ||||| || || || || || || || || |||| || |||| Sbjct 29991 CCGGAACCGAGACCGTAGGCGATGGCAGCGGCGGTAGGCTCGTTGATGATACGGAGGACA 29932 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 || || || | || | | || || || || ||||| || || ||||| || || Sbjct 29931 -TTGAGTCCGGAGATGGAACCGGCGTCCTTGGTGGCTTGACGCTGGTTGTCGTTGAAATA 29873 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || || || || ||||| || | | || ||||| ||||| Sbjct 29872 AGCTGGAACGGTGACGACAGCCTTCTCAACCTTCTTTCCGAG 29831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635121581966920