Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31]
1,413 sequences; 60,939,407 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq782 192 7e-44
seq549 93.3 5e-14
>seq782
Length=233898
Score = 192 bits (212), Expect = 7e-44
Identities = 1137/1801 (63%), Gaps = 91/1801 (5%)
Strand=Plus/Minus
Query 105581 GCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGC 105640
||| | | |||||| |||||||| || |||||||| || ||||| | | |||
Sbjct 101111 GCCATGGTTCGGAGGTAGTACATTCCAGTCTTGAGACCCATCTTCCAACCAGCAAAGTGC 101052
Query 105641 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGG 105700
|| |||| | |||| ||| || || || |||| || |||| || ||| ||
Sbjct 101051 ATGGAAGTAATCTTGCCCATGGTCGGCTCTTTCATGTGAATGTTCAAGCTCTGAGATTGA 100992
Query 105701 TCAATGAAGCGACCACGTTGTGCCGCCAT----ATCAATGACATCCTTCATCTTGATTTC 105756
||||||||| ||||| | || ||||| || |||| | || | ||||||
Sbjct 100991 TCAATGAAGGCGCCACGATCCGCAGCCATGGTGAT-AATGGTACGCTGGCT---GATTTC 100936
Query 105757 CCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGA 105816
||| || || ||| || |||||||||||| || |||| | || || || || ||
Sbjct 100935 CCAAACCGTCTTGTAAAGGGCCTTGATATCATCGGGAATATTAGGAATGTTCTGGATAGA 100876
Query 105817 ACCCCCCGCCTTGACCATGA---GATCCTTCATATCCTTGGACCAAAGACCAATCTTCTT 105873
||| ||| | || | |||| ||| |||||| | | ||||||||||| ||||
Sbjct 100875 ACCACCCTC--TG-CAATGATACGATTCTTCATGTTGTCCGACCAAAGACCCATCTCGAC 100819
Query 105874 GAGATCATTGACGAG--ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTC 105931
|||||| |||| || ||| |||||| | || || || || || | |
Sbjct 100818 GAGATCTTTGAGCAGCCATGG--GTTGACGACTTGGAATTCCCCAGCAAGCACACGACG- 100762
Query 105932 AGA-TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGT 105990
||| ||||| || | |||||| || || ||||| || || ||| | ||||| | ||
Sbjct 100761 AGAGTAGATATTTGACGTGTATGGCTCGAAGCACTCGTTGAAACCGAGAATTTGAGATGT 100702
Query 105991 GGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCG 106050
||| || |||||||| || || | | ||| ||| |||| ||| | | ||||||
Sbjct 100701 GGAAGCAGTTGGCATAGGAGCAACAAGAAGTGAGTTGCGAATACCGTGCTTCTTGATATC 100642
Query 106051 TTCCTTGAGAACATCCCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATATCAAAT 106108
||||||| |||||||| || || | | || | || |||| |||| || |
Sbjct 100641 AGCCTTGAGCGAGTCCCAGTCCCAGA-GATCCGTAGGAGTGACGTTCC-ACATGTCGTAC 100584
Query 106109 TGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCA 106168
|| || | || ||||| ||||| ||||| | || | || | |||| |||
Sbjct 100583 TGGAGAATACCCTGGGAAACTGGAGAGCCCTCGTAGGTTTTGTATGTGCCTTCTTCTTGT 100524
Query 106169 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 106228
|| | | ||| | || || || || || ||||| || ||||| || ||
Sbjct 100523 GCAAGCTTGCAGGAAGAGGTCAAGGCGGCATGGTAAATGGTCTCGAAGATTTGAATGTTG 100464
Query 106229 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA-AATAAATACATCCGCGAG 106287
| || ||| || || || || || | | || | | | || || |||| || ||
Sbjct 100463 AGCTTCTTTGCCTCGGGAGACTCGAAGG-GCAGGCGAAGAGCAAGGAAAGCATCAGCAAG 100405
Query 106288 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAAC 106347
||| || ||||| | ||| | || | ||| || || || || |||
Sbjct 100404 ACCCTGTACACCAACACCGACGGGACGGTGACGGGAGTTGCTGTTGTATGCTTCGGGAAC 100345
Query 106348 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 106407
|||||| || |||||||| ||| | || | ||| ||| || |||
Sbjct 100344 GGGATAGTGGTTGACGTCAATGATCTTGTTCAAGTTGCGAATGACAGTCTGGACGACTTC 100285
Query 106408 ATG-AAGTTTTTCATAATCAAAAGTGC-GAGTCTCTTCATTGACATACTTTGGAAGGGCG 106465
|| || || || | ||||| | || | || | | | || | |||| | ||
Sbjct 100284 GTGCAACTTGTTGA-AATCATAGACGCCGCGT-TGAACGTCAACGAAGGTTGGCAAAGCC 100227
Query 106466 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 106525
|| |||||||| ||||||||||| |||||| | | |||||| | || || ||
Sbjct 100226 ATGGATGCCAAGTTGCAAACAGCAACCTCATCAGGCGCAGAGTACTCAATGATCTCAGTG 100167
Query 106526 CACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCA 106585
|||| ||||| || ||| || ||||| ||||| || || ||||| |||||| |||
Sbjct 100166 CACAGATTGGAGCTGCGAATGGTTCCCAAGTTCTTCTGATTGCTCTTGCGGTTGCAAGCA 100107
Query 106586 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGA-GAATTGCCTTCCA 106644
|| ||||| |||||| | || | || ||||| ||||| | ||||| |||| || | |||
Sbjct 100106 TCTTTGTAAAGCATGAAAGGGTTGCCAGTCTCGGTCTGGG-CTTGAAGAATGGCGTACCA 100048
Query 106645 -----------CAC--AT-------CGGC---GGC--------TGGTAC----------- 106662
||| || |||| ||| | ||||
Sbjct 100047 GAGCTTTTGGGCACGGATAGTTTCACGGCCACGGCCTTCTTTCTCGTACCTGGGAGCGGT 99988
Query 106663 ----AATGGCGTTGGCCCGTCCCTCC--GCCTCGTACTTTGTGTAGAGGGCTTCAAACTC 106716
| ||||| | | | | || || | ||||| |||||| ||||| |||||
Sbjct 99987 TAGTATTGGCGGTAGTCAAGCACTTGTGGCAACTTACTTCTCGTAGAGAGCTTCGAACTC 99928
Query 106717 CTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACC 106776
||||| |||| ||||| || || || || || | |||| ||| | ||
Sbjct 99927 GTCACCGTAGATATCGGCAAGACCAGGGCACTCGTGAGGGCACATGAGAGTCCAGTCGCC 99868
Query 106777 ACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCT 106836
| || || || ||||||||||| ||||| |||||||||| || | || ||||| |
Sbjct 99867 ATTCTGTTCGACGCGCTTCATGAACAGGTCGGGAATCCACAAGGCATAGAAAAGATCACG 99808
Query 106837 ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGC 106896
| || || ||||| | || ||||| || | || | | | | || ||| ||
Sbjct 99807 AGCACGCGCTTCTTCTTTGCCGTGGTTCTTTCTCAGATCTAACCAGTTGAAGACATCGGC 99748
Query 106897 GTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATT 106950
|||||||||||| || |||| |||| | || ||||| ||| ||||||
Sbjct 99747 GTGCCATGGCTCGAGGTAGATGGCGAATGCACCAG---GACGCTTGTTGCCACCTTGATC 99691
Query 106951 TACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACC 107010
|| ||||| || || |||| ||| || || ||||| |||| || ||| | ||| ||
Sbjct 99690 AACGTAGCGAGCAGTCGCGTCAAAGACACGGAGCATAGGAACAAGACCGTTCGATGTGCC 99631
Query 107011 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 107070
||||| || | ||| ||| | |||||| | ||| |||| | || |||||
Sbjct 99630 GTTTGTTCCTCCAATGTATGATCCAGTGGCTCGGATGCGATGTATGTTAAGGCCGATACC 99571
Query 107071 CCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGA 107130
||||| |||||| || ||||| | | || || | |||||||| | |||
Sbjct 99570 ACCAGCGGTCTTTGAAATCATAGCACAAGTCTTGAGGGTGTCGTAGATACCCTCGATGCT 99511
Query 107131 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATT 107190
||||||||| || | || ||||||||| || | |||||| ||||| || || ||
Sbjct 99510 GTCCTCCTTCGTGTCAATGAGGAAGCAAGACGAGAGTTGCGGTTGAGGTGTGCCTGCGTT 99451
Query 107191 GAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCA 107249
||| || || || | ||||| |||| || | | ||||| | || |||||||| |
Sbjct 99450 GAAAAGTGTAGGGGAGGCGTGCGTGAAG-TATTTGTTAGACATGTAGTTGTATGTCTGTA 99392
Query 107250 AGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGG 107309
| |||| |||||||| || ||||| ||||||| ||||||||||| | ||| | ||| |
Sbjct 99391 TGGCAGATTCAATGTCCTCTCCGTGAATGCCGACTGCCACACGCATGATCATATGTTGTG 99332
Query 107310 G 107310
|
Sbjct 99331 G 99331
>seq549
Length=285283
Score = 93.3 bits (102), Expect = 5e-14
Identities = 326/499 (65%), Gaps = 10/499 (2%)
Strand=Plus/Plus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
|| || || || |||||||| || ||||| ||||| || |||| ||||| |||||
Sbjct 206706 TAATCACCGACGCGCTTCTCGAAAAAGTTAGTCTTTCCGGCAAGAGATATGTTCTCCATG 206765
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAATGGGTGGCACCCCAACTTGTTTG-AGGAGACG 117104
||||| || || || ||||| ||| || || | | | | | ||||||
Sbjct 206766 AAGTCGAAGGGGTTGACGGCGTTGTAAACCT-TGACATTGCCAAGCGCAAGCAAGAGACG 206824
Query 117105 ATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTACA 117164
||| | ||| |||| ||||||| | |||| ||||||||| |||| | | ||
Sbjct 206825 ATCAGCAACAAACTCGATGTACTGGCACATGAGGGTAGAGTTCATGCCGAGCAATCTGCA 206884
Query 117165 TGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTG 117224
|| | ||| || | ||| | | |||||| | || ||||| | | ||||||| |
Sbjct 206885 CGGTAATGCTTCGCTCAAGAATTCCTGCTCAATTTGTACTGCCTCGGTGATGATGGCGCG 206944
Query 117225 GATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGA--AGAGCTCCACGGCAAACTCC 117282
|| | ||| | | || | || | || ||| |||| |||||| ||
Sbjct 206945 GACGGCTTCAGGCGAAGGCTTCTT--GTTGAGCTGTGAGAAGAGGAGGCAGGCAAAGTCG 207002
Query 117283 TGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGA 117342
||| | ||||| || || || |||||||| || |||||| | ||| |||||||||
Sbjct 207003 GTGTGCATTCCCTCGTCGCGAGAGATAAGTTCGTTGGAGAAGGTCAAGCCGGGCATGAGA 207062
Query 117343 CCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCAC 117401
|| |||||||| | ||| | |||| ||| || | ||| ||||||||||||||| ||
Sbjct 207063 CCGCGCTTCTTGAGCCAGAAGATAGATGCA-AAGGCGCCGCTGAAGAAGATACCCTCGAC 207121
Query 117402 ACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAA-CCATTTCA 117460
| || || || | || ||| || |||| ||| | | |||| ||| ||||
Sbjct 207122 AGCTGCGAATGCGACGAGACGCGATGCAAAGG-TAGAGTTGTCATCGCAAATCCACTTCA 207180
Query 117461 TTGCCCATTTCGCCTTCTT 117479
|||||| | ||||||||
Sbjct 207181 GTGCCCAGTCGGCCTTCTT 207199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589970379464120
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