Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31]
1,413 sequences; 60,939,407 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq859 93.3 3e-14
>seq859
Length=478526
Score = 93.3 bits (102), Expect = 3e-14
Identities = 151/215 (70%), Gaps = 8/215 (4%)
Strand=Plus/Minus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||||||| | ||| ||| ||||| ||||| ||||| || | | | || |||| ||
Sbjct 225748 AACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCTTC 225689
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|| || || ||||| || || | || ||||||||| | || | |||||||||||
Sbjct 225688 GAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTG 225629
Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947
||||| ||||| || | ||||| || | |||||| || | ||| ||||
Sbjct 225628 GATCTTGGTCTTGAC--AT--TGTCGATGGTGTCTGATGACTCAACCTCCAAGGTGATGG 225573
Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
| || ||||| | |||||| || ||||| ||||||
Sbjct 225572 TCTTGCCCGTCAAAGTCTTGACGAAGATTTGCATA 225538
Score = 91.5 bits (100), Expect = 1e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837
||||| |||| || ||||| ||||| ||||| || ||| |||| |||| || |||||
Sbjct 225514 GTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTG 225455
Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897
|| ||||| || || | || ||||||||| | || | ||||||||||| ||||||
Sbjct 225454 CTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGAATCTT 225395
Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957
|||||| | || | || | || |||||| || | ||| || || ||||| ||
Sbjct 225394 GGTCTTGACGTTGTCGATGGTGTCGCTGGACTCAACCTCAAGGGTGATCGTCTTTCCGGT 225335
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324628009505064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |