Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31]
1,413 sequences; 60,939,407 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq782 232 8e-56
seq549 93.3 5e-14
>seq782
Length=233898
Score = 232 bits (256), Expect = 8e-56
Identities = 1137/1793 (63%), Gaps = 75/1793 (4%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
||||| | ||| ||||||| || ||| ||||||| ||||| || |||||||| |||| |
Sbjct 99331 CCACAACATATGATCATGCGTGTGGCAGTCGGCATTCACGGAGAGGACATTGAATCTGCC 99390
Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330
| |||||||| || | ||||| | | || |||| ||||| | || || || ||
Sbjct 99391 ATACAGACATACAACTACATGTCTAACAAATAC-TTCACGCACGCCTCCCCTACACTTTT 99449
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
||| || || ||||| |||||| | || ||||||||| || | || ||||||||
Sbjct 99450 CAACGCAGGCACACCTCAACCGCAACTCTCGTCTTGCTTCCTCATTGACACGAAGGAGGA 99509
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
| ||| | |||||||| | || || | | ||||| || |||||| |||||
Sbjct 99510 CAGCATCGAGGGTATCTACGACACCCTCAAGACTTGTGCTATGATTTCAAAGACCGCTGG 99569
Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510
||||| || | |||| ||| | |||||| | ||| ||| | || |||||
Sbjct 99570 TGGTATCGGCCTTAACATACATCGCATCCGAGCCACTGGATCATACATTGGAGGAACAAA 99629
Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570
|| ||| | ||| || |||| ||||| || || ||| |||| || || ||||| ||
Sbjct 99630 CGGCACATCGAACGGTCTTGTTCCTATGCTCCGTGTCTTTGACGCGACTGCTCGCTACGT 99689
Query 75571 AAATCAAGCGGGGCGTCGCAAGGG-----GTCCAT-CGCGGTCTACTTGGAACCATGGCA 75624
|||||| | ||| | ||| | || ||| ||| ||||| | || ||||||||
Sbjct 99690 TGATCAAG-GTGGCAAC--AAGCGTCCTGGTGCATTCGCCATCTACCTCGAGCCATGGCA 99746
Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684
|||||| || | | | | || | || ||||| || | ||||| || ||
Sbjct 99747 CGCCGATGTCTTCAACTGGTTAGATCTGAGAAAGAACCACGGCAAAGAAGAAGCGCGTGC 99806
Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744
| | ||||| || | || |||||||||| ||||| ||||||||||| || || ||
Sbjct 99807 TCGTGATCTTTTCTATGCCTTGTGGATTCCCGACCTGTTCATGAAGCGCGTCGAACAGAA 99866
Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804
||| | ||| |||| | || || || || || ||||| |||| |||||
Sbjct 99867 TGGCGACTGGACTCTCATGTGCCCTCACGAGTGCCCTGGTCTTGCCGATATCTACGGTGA 99926
Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATG-------AAGAG-GAGGGTAGAGCCAATGCG 75856
||||| ||||| |||||| ||||| | ||| | | || |||||| |
Sbjct 99927 CGAGTTCGAAGCTCTCTACGAGAAGTAAGTTGCCACAAGTGCTTGACTACCGCCAATACT 99986
Query 75857 A----CT-----GTACCA--------GCC---GCCG--------------------ATGT 75876
| || |||| | ||| |||| | |
Sbjct 99987 AACCGCTCCCAGGTACGAGAAAGAAGGCCGTGGCCGTGAAACTATCCGTGCCCAAAAGCT 100046
Query 75877 TTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGA 75936
||| | || ||||| || | ||||| |||||||| | || | ||||||||||| ||
Sbjct 100047 CTGGTACGCCATTCTTCAAGCCCAGACCGAGACTGGCAACCCTTTCATGCTTTACAAAGA 100106
Query 75937 TGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTG 75996
|||||| ||| ||||| || || ||||| |||||||| || ||||| ||||| ||
Sbjct 100107 TGCTTGCAACCGCAAGAGCAATCAGAAGAACTTGGGAACCATTCGCAGCTCCAATCTGTG 100166
Query 75997 CACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAAT 76056
||| || || | |||||| | | |||||| ||||||||||| |||||||| ||
Sbjct 100167 CACTGAGATCATTGAGTACTCTGCGCCTGATGAGGTTGCTGTTTGCAACTTGGCATCCAT 100226
Query 76057 CGCCCTTCCAAAGTATGTCAATGAAGAGACTC-GCACTTTTGATTATGAAAAACTT-CAT 76114
|| | |||| | || | | | || | || | ||||| | || || || ||
Sbjct 100227 GGCTTTGCCAACCTTCGTTGACGTTCA-ACGCGGCGTCTATGATT-TCAACAAGTTGCAC 100284
Query 76115 GAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCC 76174
||| || ||| ||| | || | ||| |||||||| || ||||||
Sbjct 100285 GAAGTCGTCCAGACTGTCATTCGCAACTTGAACAAGATCATTGACGTCAACCACTATCCC 100344
Query 76175 GTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGT 76234
||| || || || || ||| | || | ||| | ||||| || |||
Sbjct 100345 GTTCCCGAAGCATACAACAGCAACTCCCGTCACCGTCCCGTCGGTGTTGGTGTACAGGGT 100404
Query 76235 CTCGCGGATGTATTTATT-TTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGAT 76293
|| || |||| || || | | | || | | || || || || || ||| || |
Sbjct 100405 CTTGCTGATGCTTTCCTTGCTCTTCGCCTGC-CCTTCGAGTCTCCCGAGGCAAAGAAGCT 100463
Query 76294 GAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGC 76353
|| || ||||| || ||||| || || || || || | || | | ||
Sbjct 100464 CAACATTCAAATCTTCGAGACCATTTACCATGCCGCCTTGACCTCTTCCTGCAAGCTTGC 100523
Query 76354 TGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCA 76413
||| |||| | || | || | ||||| ||||| | ||||| || | || ||
Sbjct 100524 ACAAGAAGAAGGCACATACAAAACCTACGAGGGCTCTCCAGTTTCCCAGGGTATTCTCCA 100583
Query 76414 GTTTGATATGTGGGAAGGTGAAACCAA--GCTCAACTACGACTGGGATGTTCTCAAGGAA 76471
|| || |||| |||| || | || | | || || |||||||| |||||||
Sbjct 100584 GTACGACATGT-GGAACGTCACTCCTACGGATC-TCTGGGACTGGGACTCGCTCAAGGCT 100641
Query 76472 CGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCC 76531
|||||| || | ||| |||| ||| ||| | | || || |||||||| || |||
Sbjct 100642 GATATCAAGAAGCACGGTATTCGCAACTCACTTCTTGTTGCTCCTATGCCAACTGCTTCC 100701
Query 76532 ACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTG 76591
|| | ||||| | ||| || || ||||| || |||||||| |||| ||||||
Sbjct 100702 ACATCTCAAATTCTCGGTTTCAACGAGTGCTTCGAGCCATACACGTCAAATATCTACTCT 100761
Query 76592 AGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAG 76651
| | || || || || || | |||||| || |||| || |||
Sbjct 100762 CGTCGTGTGCTTGCTGGGGAATTCCAAGTCGTCAACCCATGGCTGCTCAAAGATCTCGTC 100821
Query 76652 AAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATT 76711
|||| ||||| ||||| | | |||||| ||| || | || ||||||||| ||
Sbjct 100822 GAGATGGGTCTTTGGTCGGACAACATGAAGAATCGTATCATTGCAGAGGGTGGTTCTATC 100881
Query 76712 CAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAATC 76771
|| || || | |||| || |||||||||||| || ||| || || |||||||||
Sbjct 100882 CAGAACATTCCTAATATTCCCGATGATATCAAGGCCCTTTACAAGACGGTTTGGGAAATC 100941
Query 76772 A---AGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGT 76828
| || | | | | || |||||| || |||||||| ||||||||||||| |
Sbjct 100942 AGCCAG-CGTACCA--TTATCACCATGGCTGCGGATCGTGGCGCCTTCATTGATCAATCT 100998
Query 76829 CAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATATG 76888
|| || |||| | |||| || || || ||| |||| | |||| ||||| |
Sbjct 100999 CAGAGCTTGAACATTCACATGAAAGAGCCGACCATGGGCAAGATTACTTCCATGCACTTT 101058
Query 76889 TACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCGATCAAAGGC 76941
| ||||| ||| ||||| || ||||||||||| |||||| | | |||
Sbjct 101059 GCTGGTTGGAAGATGGGTCTCAAGACTGGAATGTACTACCTCCGAACCATGGC 101111
>seq549
Length=285283
Score = 93.3 bits (102), Expect = 5e-14
Identities = 326/499 (65%), Gaps = 10/499 (2%)
Strand=Plus/Minus
Query 65023 AAGAAGGCGAAATGGGCAATGAAATGG-TTTGACACAAAGTCTCGCTCCTTCGCCGAGCG 65081
|||||||| | |||||| |||| ||| |||| | | ||| |||| || |||
Sbjct 207199 AAGAAGGCCGACTGGGCACTGAAGTGGATTTGCGATGACAACTCTA-CCTTTGCATCGCG 207141
Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTT 65140
|| | || || || ||| ||||||||||||||| ||| | || ||| |||| |
Sbjct 207140 TCTCGTCGCATTCGCAGCTGTCGAGGGTATCTTCTTCAGCGGCGCCTT-TGCATCTATCT 207082
Query 65141 ATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCC 65200
||| | |||||||| ||||||||||| ||| | |||||| || |||||||| || |
Sbjct 207081 TCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCTTGACCTTCTCCAACGAACTTATCTCTC 207022
Query 65201 GAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCT--TCAAGACTTTGCGTAATAG 65258
| || ||||| | ||| || |||||| |||| ||| || | || |
Sbjct 207021 GCGACGAGGGAATGCACACCGACTTTGCCTGCCTCCTCTTCTCACAGCTCAAC--AAGAA 206964
Query 65259 ACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTT 65318
|| | | ||| | ||| ||||||| | | ||||| || | |||||| | | ||
Sbjct 206963 GCCTTCGCCTGAAGCCGTCCGCGCCATCATCACCGAGGCAGTACAAATTGAGCAGGAATT 206904
Query 65319 CATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTA 65378
| | || ||| | || || | | |||| ||||||||| |||| | ||||
Sbjct 206903 CTTGAGCGAAGCATTACCGTGCAGATTGCTCGGCATGAACTCTACCCTCATGTGCCAGTA 206844
Query 65379 CATTGAGTATGTGTCGGATCGTCTCCT-CAAACAAGTTGGGGTGCCACCCATTTGGAACG 65437
||| |||| ||| | ||||||||| | | | | | || || ||| ||||
Sbjct 206843 CATCGAGTTTGTTGCTGATCGTCTCTTGCTTGCGCTTGGCAATGTCA-AGGTTTACAACG 206785
Query 65438 CGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTG 65497
| || || || ||||| ||||| ||||| |||| || ||||| ||||| || |
Sbjct 206784 CCGTCAACCCCTTCGACTTCATGGAGAACATATCTCTTGCCGGAAAGACTAACTTTTTCG 206725
Query 65498 AGAAGCGAGTTGGGGACTA 65516
||||||| || || || ||
Sbjct 206724 AGAAGCGCGTCGGTGATTA 206706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596559063089440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |