Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq782 232 8e-56 seq549 93.3 5e-14 >seq782 Length=233898 Score = 232 bits (256), Expect = 8e-56 Identities = 1137/1793 (63%), Gaps = 75/1793 (4%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 ||||| | ||| ||||||| || ||| ||||||| ||||| || |||||||| |||| | Sbjct 99331 CCACAACATATGATCATGCGTGTGGCAGTCGGCATTCACGGAGAGGACATTGAATCTGCC 99390 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | |||||||| || | ||||| | | || |||| ||||| | || || || || Sbjct 99391 ATACAGACATACAACTACATGTCTAACAAATAC-TTCACGCACGCCTCCCCTACACTTTT 99449 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || || ||||| |||||| | || ||||||||| || | || |||||||| Sbjct 99450 CAACGCAGGCACACCTCAACCGCAACTCTCGTCTTGCTTCCTCATTGACACGAAGGAGGA 99509 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | ||| | |||||||| | || || | | ||||| || |||||| ||||| Sbjct 99510 CAGCATCGAGGGTATCTACGACACCCTCAAGACTTGTGCTATGATTTCAAAGACCGCTGG 99569 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 ||||| || | |||| ||| | |||||| | ||| ||| | || ||||| Sbjct 99570 TGGTATCGGCCTTAACATACATCGCATCCGAGCCACTGGATCATACATTGGAGGAACAAA 99629 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 || ||| | ||| || |||| ||||| || || ||| |||| || || ||||| || Sbjct 99630 CGGCACATCGAACGGTCTTGTTCCTATGCTCCGTGTCTTTGACGCGACTGCTCGCTACGT 99689 Query 75571 AAATCAAGCGGGGCGTCGCAAGGG-----GTCCAT-CGCGGTCTACTTGGAACCATGGCA 75624 |||||| | ||| | ||| | || ||| ||| ||||| | || |||||||| Sbjct 99690 TGATCAAG-GTGGCAAC--AAGCGTCCTGGTGCATTCGCCATCTACCTCGAGCCATGGCA 99746 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 |||||| || | | | | || | || ||||| || | ||||| || || Sbjct 99747 CGCCGATGTCTTCAACTGGTTAGATCTGAGAAAGAACCACGGCAAAGAAGAAGCGCGTGC 99806 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 | | ||||| || | || |||||||||| ||||| ||||||||||| || || || Sbjct 99807 TCGTGATCTTTTCTATGCCTTGTGGATTCCCGACCTGTTCATGAAGCGCGTCGAACAGAA 99866 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804 ||| | ||| |||| | || || || || || ||||| |||| ||||| Sbjct 99867 TGGCGACTGGACTCTCATGTGCCCTCACGAGTGCCCTGGTCTTGCCGATATCTACGGTGA 99926 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATG-------AAGAG-GAGGGTAGAGCCAATGCG 75856 ||||| ||||| |||||| ||||| | ||| | | || |||||| | Sbjct 99927 CGAGTTCGAAGCTCTCTACGAGAAGTAAGTTGCCACAAGTGCTTGACTACCGCCAATACT 99986 Query 75857 A----CT-----GTACCA--------GCC---GCCG--------------------ATGT 75876 | || |||| | ||| |||| | | Sbjct 99987 AACCGCTCCCAGGTACGAGAAAGAAGGCCGTGGCCGTGAAACTATCCGTGCCCAAAAGCT 100046 Query 75877 TTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGA 75936 ||| | || ||||| || | ||||| |||||||| | || | ||||||||||| || Sbjct 100047 CTGGTACGCCATTCTTCAAGCCCAGACCGAGACTGGCAACCCTTTCATGCTTTACAAAGA 100106 Query 75937 TGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTG 75996 |||||| ||| ||||| || || ||||| |||||||| || ||||| ||||| || Sbjct 100107 TGCTTGCAACCGCAAGAGCAATCAGAAGAACTTGGGAACCATTCGCAGCTCCAATCTGTG 100166 Query 75997 CACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAAT 76056 ||| || || | |||||| | | |||||| ||||||||||| |||||||| || Sbjct 100167 CACTGAGATCATTGAGTACTCTGCGCCTGATGAGGTTGCTGTTTGCAACTTGGCATCCAT 100226 Query 76057 CGCCCTTCCAAAGTATGTCAATGAAGAGACTC-GCACTTTTGATTATGAAAAACTT-CAT 76114 || | |||| | || | | | || | || | ||||| | || || || || Sbjct 100227 GGCTTTGCCAACCTTCGTTGACGTTCA-ACGCGGCGTCTATGATT-TCAACAAGTTGCAC 100284 Query 76115 GAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCC 76174 ||| || ||| ||| | || | ||| |||||||| || |||||| Sbjct 100285 GAAGTCGTCCAGACTGTCATTCGCAACTTGAACAAGATCATTGACGTCAACCACTATCCC 100344 Query 76175 GTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGT 76234 ||| || || || || ||| | || | ||| | ||||| || ||| Sbjct 100345 GTTCCCGAAGCATACAACAGCAACTCCCGTCACCGTCCCGTCGGTGTTGGTGTACAGGGT 100404 Query 76235 CTCGCGGATGTATTTATT-TTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGAT 76293 || || |||| || || | | | || | | || || || || || ||| || | Sbjct 100405 CTTGCTGATGCTTTCCTTGCTCTTCGCCTGC-CCTTCGAGTCTCCCGAGGCAAAGAAGCT 100463 Query 76294 GAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGC 76353 || || ||||| || ||||| || || || || || | || | | || Sbjct 100464 CAACATTCAAATCTTCGAGACCATTTACCATGCCGCCTTGACCTCTTCCTGCAAGCTTGC 100523 Query 76354 TGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCA 76413 ||| |||| | || | || | ||||| ||||| | ||||| || | || || Sbjct 100524 ACAAGAAGAAGGCACATACAAAACCTACGAGGGCTCTCCAGTTTCCCAGGGTATTCTCCA 100583 Query 76414 GTTTGATATGTGGGAAGGTGAAACCAA--GCTCAACTACGACTGGGATGTTCTCAAGGAA 76471 || || |||| |||| || | || | | || || |||||||| ||||||| Sbjct 100584 GTACGACATGT-GGAACGTCACTCCTACGGATC-TCTGGGACTGGGACTCGCTCAAGGCT 100641 Query 76472 CGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCC 76531 |||||| || | ||| |||| ||| ||| | | || || |||||||| || ||| Sbjct 100642 GATATCAAGAAGCACGGTATTCGCAACTCACTTCTTGTTGCTCCTATGCCAACTGCTTCC 100701 Query 76532 ACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTG 76591 || | ||||| | ||| || || ||||| || |||||||| |||| |||||| Sbjct 100702 ACATCTCAAATTCTCGGTTTCAACGAGTGCTTCGAGCCATACACGTCAAATATCTACTCT 100761 Query 76592 AGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAG 76651 | | || || || || || | |||||| || |||| || ||| Sbjct 100762 CGTCGTGTGCTTGCTGGGGAATTCCAAGTCGTCAACCCATGGCTGCTCAAAGATCTCGTC 100821 Query 76652 AAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATT 76711 |||| ||||| ||||| | | |||||| ||| || | || ||||||||| || Sbjct 100822 GAGATGGGTCTTTGGTCGGACAACATGAAGAATCGTATCATTGCAGAGGGTGGTTCTATC 100881 Query 76712 CAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAATC 76771 || || || | |||| || |||||||||||| || ||| || || ||||||||| Sbjct 100882 CAGAACATTCCTAATATTCCCGATGATATCAAGGCCCTTTACAAGACGGTTTGGGAAATC 100941 Query 76772 A---AGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGT 76828 | || | | | | || |||||| || |||||||| ||||||||||||| | Sbjct 100942 AGCCAG-CGTACCA--TTATCACCATGGCTGCGGATCGTGGCGCCTTCATTGATCAATCT 100998 Query 76829 CAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATATG 76888 || || |||| | |||| || || || ||| |||| | |||| ||||| | Sbjct 100999 CAGAGCTTGAACATTCACATGAAAGAGCCGACCATGGGCAAGATTACTTCCATGCACTTT 101058 Query 76889 TACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCGATCAAAGGC 76941 | ||||| ||| ||||| || ||||||||||| |||||| | | ||| Sbjct 101059 GCTGGTTGGAAGATGGGTCTCAAGACTGGAATGTACTACCTCCGAACCATGGC 101111 >seq549 Length=285283 Score = 93.3 bits (102), Expect = 5e-14 Identities = 326/499 (65%), Gaps = 10/499 (2%) Strand=Plus/Minus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGG-TTTGACACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||||| | |||||| |||| ||| |||| | | ||| |||| || ||| Sbjct 207199 AAGAAGGCCGACTGGGCACTGAAGTGGATTTGCGATGACAACTCTA-CCTTTGCATCGCG 207141 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTT 65140 || | || || || ||| ||||||||||||||| ||| | || ||| |||| | Sbjct 207140 TCTCGTCGCATTCGCAGCTGTCGAGGGTATCTTCTTCAGCGGCGCCTT-TGCATCTATCT 207082 Query 65141 ATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCC 65200 ||| | |||||||| ||||||||||| ||| | |||||| || |||||||| || | Sbjct 207081 TCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCTTGACCTTCTCCAACGAACTTATCTCTC 207022 Query 65201 GAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCT--TCAAGACTTTGCGTAATAG 65258 | || ||||| | ||| || |||||| |||| ||| || | || | Sbjct 207021 GCGACGAGGGAATGCACACCGACTTTGCCTGCCTCCTCTTCTCACAGCTCAAC--AAGAA 206964 Query 65259 ACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTT 65318 || | | ||| | ||| ||||||| | | ||||| || | |||||| | | || Sbjct 206963 GCCTTCGCCTGAAGCCGTCCGCGCCATCATCACCGAGGCAGTACAAATTGAGCAGGAATT 206904 Query 65319 CATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTA 65378 | | || ||| | || || | | |||| ||||||||| |||| | |||| Sbjct 206903 CTTGAGCGAAGCATTACCGTGCAGATTGCTCGGCATGAACTCTACCCTCATGTGCCAGTA 206844 Query 65379 CATTGAGTATGTGTCGGATCGTCTCCT-CAAACAAGTTGGGGTGCCACCCATTTGGAACG 65437 ||| |||| ||| | ||||||||| | | | | | || || ||| |||| Sbjct 206843 CATCGAGTTTGTTGCTGATCGTCTCTTGCTTGCGCTTGGCAATGTCA-AGGTTTACAACG 206785 Query 65438 CGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTG 65497 | || || || ||||| ||||| ||||| |||| || ||||| ||||| || | Sbjct 206784 CCGTCAACCCCTTCGACTTCATGGAGAACATATCTCTTGCCGGAAAGACTAACTTTTTCG 206725 Query 65498 AGAAGCGAGTTGGGGACTA 65516 ||||||| || || || || Sbjct 206724 AGAAGCGCGTCGGTGATTA 206706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596559063089440