Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq859 104 6e-17 >seq859 Length=478526 Score = 104 bits (114), Expect = 6e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || || || | ||||| ||| |||||||| |||| Sbjct 225782 AAGACCCTCACCGGCAAGACTATTACACTAGAAGTTGAATCCTCTGACACCATCGACAAC 225841 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || ||||| ||| || ||| || | || |||||| Sbjct 225842 GTCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAGCAGCGCCTCATCTTC 225901 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||||||||||||||||||| | || || ||| |||||| ||||||| ||||| Sbjct 225902 GCCGGAAAGCAGTTGGAAGATGGACGTACGCTGAGCGACTACAACATCCAGAAGGAGTCG 225961 Query 206365 AC 206366 || Sbjct 225962 AC 225963 Score = 84.2 bits (92), Expect = 5e-11 Identities = 132/187 (71%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTG--ACACAGTCGAATCAGTAAAGC 206251 || ||||| |||||||| | || || || || | | |||| |||| || ||| Sbjct 225335 ACCGGAAAGACGATCACCCTTGAGGTTGA--GTCCAGCGACACCATCGACAACGTCAAGA 225392 Query 206252 AAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAA 206311 ||||||||||| || || ||||| || ||| || | | ||||||||||| | Sbjct 225393 CCAAGATTCAAGACAAGGAGGGAATCCCACCAGACCAGCAGCGCTTGATCTTCGCCGGCA 225452 Query 206312 AGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTC 206371 ||||| | || ||||| | || | |||| |||||| ||||||| ||||| || |||| Sbjct 225453 AGCAGCTCGAGGATGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCCACACTTC 225512 Query 206372 ACCTTGT 206378 ||||||| Sbjct 225513 ACCTTGT 225519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181799404242373