Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31]
1,413 sequences; 60,939,407 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq859 104 6e-17
>seq859
Length=478526
Score = 104 bits (114), Expect = 6e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || || || || | ||||| ||| |||||||| ||||
Sbjct 225782 AAGACCCTCACCGGCAAGACTATTACACTAGAAGTTGAATCCTCTGACACCATCGACAAC 225841
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || ||||| ||| || ||| || | || ||||||
Sbjct 225842 GTCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAGCAGCGCCTCATCTTC 225901
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||||||||||||||||||| | || || ||| |||||| ||||||| |||||
Sbjct 225902 GCCGGAAAGCAGTTGGAAGATGGACGTACGCTGAGCGACTACAACATCCAGAAGGAGTCG 225961
Query 206365 AC 206366
||
Sbjct 225962 AC 225963
Score = 84.2 bits (92), Expect = 5e-11
Identities = 132/187 (71%), Gaps = 4/187 (2%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTG--ACACAGTCGAATCAGTAAAGC 206251
|| ||||| |||||||| | || || || || | | |||| |||| || |||
Sbjct 225335 ACCGGAAAGACGATCACCCTTGAGGTTGA--GTCCAGCGACACCATCGACAACGTCAAGA 225392
Query 206252 AAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAA 206311
||||||||||| || || ||||| || ||| || | | ||||||||||| |
Sbjct 225393 CCAAGATTCAAGACAAGGAGGGAATCCCACCAGACCAGCAGCGCTTGATCTTCGCCGGCA 225452
Query 206312 AGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTC 206371
||||| | || ||||| | || | |||| |||||| ||||||| ||||| || ||||
Sbjct 225453 AGCAGCTCGAGGATGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCCACACTTC 225512
Query 206372 ACCTTGT 206378
|||||||
Sbjct 225513 ACCTTGT 225519
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181799404242373
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |