Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31]
1,413 sequences; 60,939,407 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq859 111 1e-19
>seq859
Length=478526
Score = 111 bits (122), Expect = 1e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| |||| |||||| || | || || || ||||| || || ||
Sbjct 225729 TCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAG 225670
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||| ||||||||||| | || | | |||||||||| |||||| ||| | | |
Sbjct 225669 ATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACATTG 225610
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || || ||||||| ||||| || || ||||||||||| || ||
Sbjct 225609 TCGATGGTGTCTGATGACTCAACCTCCAAGGTGATGGTCTTGCCCGTCAAAGTCTTGACG 225550
Query 35726 AATATCTGCAT 35736
|| || |||||
Sbjct 225549 AAGATTTGCAT 225539
Score = 95.1 bits (104), Expect = 1e-14
Identities = 125/171 (73%), Gaps = 2/171 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| | |||||| | || || |||||||| || || ||
Sbjct 225502 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAA 225443
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||| ||||||||||| | || | | ||||||||| ||||| ||| | ||
Sbjct 225442 GATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGAATCTTGGTCTTGA-CGT 225384
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714
|| | | |||||||| || || ||||| | |||||||| || || ||||
Sbjct 225383 TGTCGATGGTGTCGCTGGACTCAACCTCAAGGGTGATCGTCTTTCCGGTCA 225333
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450785637858040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |