Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq782 125 1e-23 >seq782 Length=233898 Score = 125 bits (138), Expect = 1e-23 Identities = 416/637 (65%), Gaps = 10/637 (2%) Strand=Plus/Minus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATT 69653 || || ||||| || || ||||||||||| | || ||| || ||||| | | | Sbjct 99857 ACGCGCTTCATGAACAGGTCGGGAATCCACA-AGGCATAGAAAAGATCACGAGCACGCGC 99799 Query 69654 TTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 69713 |||||| || || || ||| | ||||| | | | | | ||| | |||||||| Sbjct 99798 TTCTTCTTTGCCGTGGTTCTTTCTCAGATCTAACCAGTTGAAGACATCGGCGTGCCATGG 99739 Query 69714 TTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGC 69773 || || || || || | | || || || || || || || ||||| | ||| | || Sbjct 99738 CTCGAGGTAGATGGCGAATGCACCAGGACGCTTGTTGCCACCTTGATCAACGTAGCGAGC 99679 Query 69774 AGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGA 69833 ||| | | |||| | ||||| |||| || ||| || ||| | || |||||||| Sbjct 99678 AGTCGCGTCAAAGACACGGAGCATAGGAACAAGACCGTTCGATGTGCCGTTTGTTCCTCC 99619 Query 69834 AATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTT 69893 ||| || ||| | || || || | || || || || || || || | || Sbjct 99618 AATGTATGATCCAGTGGCTCGGATGCGATGTATGTTAAGGCCGATACCACCAGCGGTCTT 99559 Query 69894 AGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCAT 69953 || || | ||||||| || | ||||| || |||||||| ||||| || || || | Sbjct 99558 TGAAATCATAGCACAAGTCTTGAGGGTGTCGTAGATACCCTCGATGCTGTCCTCCTTCGT 99499 Query 69954 GTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGG 70013 || || || || || || | ||| | || || || || || || | |||||| Sbjct 99498 GTCAATGAGGAAGCAAGACGAGAGTTGCGGTTGAGGTGTGCCTGCGTTGAAAAGTGTAGG 99439 Query 70014 AGATGCGTGAGTGAACCATTTTTCAGA-AAGCAGATTGTATGTTTCAATAGCTGATTCTA 70072 || ||||| ||||| |||| | ||| | | || |||||||| | || || ||||| | Sbjct 99438 GGAGGCGTGCGTGAAGTATTTGTTAGACATGTAG-TTGTATGTCTGTATGGCAGATTCAA 99380 Query 70073 TATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACC 70131 | ||| | | | ||||| || | || |||||||| | |||||| || || || || | Sbjct 99379 TGTCCTCTCCG-TGAATGCCGACTGCCACACGCATGATCATATGTTGTGGACGCTCAGCG 99321 Query 70132 GTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTG 70191 || ||||| | ||||||||| |||||||| || || ||||| || | | Sbjct 99320 ACCTTGCCGCTTATTCGGAGTAGGTATGATCGCTCCAGAGTCTTGAAGCCAAAGTATTGG 99261 Query 70192 TA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATT 70226 || ||||| ||||| ||||| | ||| |||| || Sbjct 99260 TAATTGAAA--TCTCTGTCGTATACAATGGCAGAGTT 99226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686896667473320