Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq859 143 8e-29 seq91 95.1 4e-14 seq848 91.5 4e-13 >seq859 Length=478526 Score = 143 bits (158), Expect = 8e-29 Identities = 487/746 (65%), Gaps = 22/746 (3%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| || |||||||| ||||| || || || || || | | | | | |||| ||| Sbjct 182215 GCTATCGGTATCGATTTGGGTACCACGTACTCCTGCGTGGGTATCTTCAGAGATGACCGT 182156 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 | ||||| ||||| || || || |||||| | ||||| ||||| | |||||| || || Sbjct 182155 ATCGAAATCATTGCCAACGACCAGGGTAACCGCACAACACCATCCTTCGTTGCCTTCACA 182096 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || || ||| | |||||||| || || || ||||| | || || || || Sbjct 182095 GATACGGAACGTCTCATTGGTGACTCGGCGAAGAATCAGGTCGCCATGAACCCCGTCAAC 182036 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTT-----TTCTGACAAATCTACA 349432 || || || ||||| ||||| || || ||| | |||||| | |||| || Sbjct 182035 ACTGTCTTCGATGCCAAGCGCCTCATCGGTCGCAAGTTTGCCGATGCTGAGG--TC---- 181982 Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGA-CGGTGATAAACCAAT 349491 || ||||| | || || || || || | | || | | ||| ||| || || | Sbjct 181981 CAGGCTGATATGAAGCACTTCCCCTTCAAGATCGT-CGACAAGCTCGGC---AAGCCTGT 181926 Query 349492 TATTGAGGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAA 349550 | | || |||| | || || || || || || || ||| || || || || || | Sbjct 181925 TGTCCAGATTGAGTTCAAGGGCGAGACCAAGACT-TTCACACCAGAGGAGATCTCCTCCA 181867 Query 349551 TGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATG 349610 || | || || ||| || | |||||| |||| | || | || || | | | Sbjct 181866 TGATCTTGACCAAGATGCGCGAGACCGCTGAATCATACCTCGGAGGTACCGTCAACAACG 181807 Query 349611 CTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTG 349670 | || | || || ||||| || || || || | ||||| || ||||| || || | Sbjct 181806 CCGTCGTCACAGTCCCAGCATACTTCAACGACTCGCAGCGGCAAGCCACAAAGGACGCCG 181747 Query 349671 GCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTG 349730 | |||||| || | || || || | || || || |||||||| || || || || | Sbjct 181746 GTCTCATTGCTGGTCTCAACGTCCTTCGTATCATCAACGAACCCACAGCCGCTGCCATCG 181687 Query 349731 CATATGGGCTTGATAAAATGAGTGACCAA-GaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 | ||||| || || || | | | || || || | || || || ||| | ||| Sbjct 181686 CTTATGGTCTCGACAAGAAG-GCCACTGGTGAGCGCAACGTCCTCATCTTCGATCTCGGT 181628 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 || || || || ||||| || || | || |||| ||||| || || || || || | Sbjct 181627 GGAGGAACCTTCGATGTGTCTCTTTTGACCATTGAGGAGGGTATCTTCGAGGTCAAGTCC 181568 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 ||||||||||| || || | || || ||||| || || || ||||||||| || || Sbjct 181567 ACTGCTGGTGACACCCACTTGGGAGGTGAAGACTTCGACAACCGTCTCGTTAACCACTTC 181508 Query 349910 GTTAAAGAATTTAAGCGTCAAGCTAA 349935 || || ||||| ||||| |||| ||| Sbjct 181507 GTCAACGAATTCAAGCG-CAAGGTAA 181483 Score = 107 bits (118), Expect = 6e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || ||||| ||||| || ||||| || || || || | Sbjct 225545 TTTGCATACCACCACGGAGGCGGAGGACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGT 225486 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | ||||| ||||| || || || || || || ||||| | || ||||| | Sbjct 225485 AGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGT 225426 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || ||||| || || || ||||| || | || || || || || | || | || Sbjct 225425 CTGGTGGGATTCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATGGTGTC-GCTG 225367 Query 140683 GT-TCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719 | ||||| ||||| || | ||||||||||| | ||| Sbjct 225366 GACTCAACCTCAAGGGTGATCGTCTTTCCGGTCACTGT 225329 >seq91 Length=155134 Score = 95.1 bits (104), Expect = 4e-14 Identities = 98/128 (77%), Gaps = 3/128 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || || |||||| | || |||||| || || | ||||| || || |||||||| ||| Sbjct 34140 CGAGGAACACCAAGCGTCACATTC---TTTGACGAGACACCGGCGAAATGGAAAGTGTTA 34084 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | ||| || | ||| |||||||| ||||| ||||||| |||||||||||| || Sbjct 34083 AGCGTCATTTGTGTTGCGGGTTCACCAATCGACTGTGCTGCAAGAACGCCAACCATGTCA 34024 Query 377578 CCAGGATT 377585 || || || Sbjct 34023 CCCGGGTT 34016 >seq848 Length=225143 Score = 91.5 bits (100), Expect = 4e-13 Identities = 138/195 (71%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 140535 TGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGT 140594 |||| ||| | | | ||||| || || || || || || || ||||| || | ||| Sbjct 108659 TGAAAAGTCG-CACCTTTTGGATGTTGTAGTCGCTCAAGGTACGTCCATCCTCCAATTGC 108717 Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 |||||||||||||||| || || || || || |||||||| || || || || || || Sbjct 108718 TTTCCAGCAAAGATTAATCGCTGTTGGTCTGGCGGAATTCCCTCCTTGTCTTGGATCTTG 108777 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 | || ||||| || || | ||||| | || || ||||| || | ||||| || || Sbjct 108778 GTCTTGACATTGTCGATAGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTG 108837 Query 140715 AGTGTTTTTACAAAA 140729 || ||||| || ||| Sbjct 108838 AGGGTTTTGACGAAA 108852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515226967739639