Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq782 138 1e-27 >seq782 Length=233898 Score = 138 bits (152), Expect = 1e-27 Identities = 359/541 (66%), Gaps = 6/541 (1%) Strand=Plus/Plus Query 53244 AGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACG 53303 |||| ||| ||| ||| | || ||||| ||||||||| | || || || ||||||| Sbjct 99395 AGACATACAACTACATGTCTAACAAATACTTCACGCACGCCTCCCCTACACTTTTCAACG 99454 Query 53304 CTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGA 53363 | || || ||| || || | ||| |||||||| | | | |||||| ||| | Sbjct 99455 CAGGCACACCTCAACCGCAACTCTCGTCTTGCTTCCTCATTGACACGAAGGAGGACAGCA 99514 Query 53364 TCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTA 53423 |||| || |||||||| || |||||| ||||| || || ||| | ||||||| Sbjct 99515 TCGAGGGTATCTACGACACCCTCAAGACTTGTGCTATGATTTCAAAGACCGCTGGTGGTA 99574 Query 53424 TCGGTATCCAC-TGC-TCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481 |||| | || | | ||| | |||| || | || || || || || ||||| Sbjct 99575 TCGGCCTTAACATACATCGCA--TCCGAGCCACTGGATCATACATTGGAGGAACAAACGG 99632 Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541 | | | || | || ||||||||||| ||||| || || || || ||||| | Sbjct 99633 CACATCGAACGGTCTTGTTCCTATGCTCCGTGTCTTTGACGCGACTGCTCGCTACGTTGA 99692 Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601 || ||||| ||||| || | |||||||||||||||||||| ||||||||||| Sbjct 99693 TCAAGGTGGCAACAAGCGTCCTGGTGCATTCGCCATCTACCTCGAGCCATGGCACGCCGA 99752 Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTG 53660 | | | | | || ||| | ||| || || | ||||| ||| ||| |||| Sbjct 99753 TGTCTTCAACTGGTTAGATCTGAGAAAGAACCACGGCAAAGAAGAAGCGCG-TGCTCGTG 99811 Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720 | || || || |||||||||| ||||| |||||| | || || || | | | Sbjct 99812 ATCTTTTCTATGCCTTGTGGATTCCCGACCTGTTCATGAAGCGCGTCGAACAGAATGGCG 99871 Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT 53780 | ||| || |||||||| |||||||||| || || | | |||||||||| |||| Sbjct 99872 ACTGGACTCTCATGTGCCCTCACGAGTGCCCTGGTCTTGCCGATATCTACGGTGACGAGT 99931 Query 53781 T 53781 | Sbjct 99932 T 99932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547206334797400