Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq859 167 3e-36 seq848 136 5e-27 seq519 98.7 1e-15 >seq859 Length=478526 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| | || |||||||| || || | |||||||||||| Sbjct 225539 ATGCAAATCTTCGTCAAGACTTTGACGGGCAAGACCATCACCTTGGAGGTTGAGTCATCA 225598 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| | || || |||||||||||||| || || ||||||||| Sbjct 225599 GACACCATCGACAATGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAG 225658 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || || || ||||||||||| |||| || ||| | | ||||| || Sbjct 225659 CAGCGCTTGATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCACCTTGTCCGACTACAAC 225718 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||||||||| || | || | ||||| |||||||| Sbjct 225719 ATCCAGAAGGAATCCACTCTCCACTTGGTTCTACGTCTCCGCGGTGG 225765 Score = 150 bits (166), Expect = 2e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||| ||||| || || |||||||||||||| | || | ||| | || | ||| | Sbjct 225335 ACCGGAAAGACGATCACCCTTGAGGTTGAGTCCAGCGACACCATCGACAACGTCAAGACC 225394 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||| |||||||||||||| || |||||||||||||| | || || || || ||| Sbjct 225395 AAGATTCAAGACAAGGAGGGAATCCCACCAGACCAGCAGCGCTTGATCTTCGCCGGCAAG 225454 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || |||||||||| || ||||| | ||||| || |||| ||||| ||||| ||||| Sbjct 225455 CAGCTCGAGGATGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCCACACTTCAC 225514 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || || || ||||| Sbjct 225515 CTTGTCCTCCGCCTCCGTGGTGG 225537 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || ||||||||||||||||| || || ||||| || | Sbjct 225767 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACTATTACACTAGAAGTTGAATCCTCT 225826 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | || || ||||||||||| || ||||||||||||||| Sbjct 225827 GACACCATCGACAACGTCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAG 225886 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || || || || ||||| | || |||| ||||| || ||| ||||| || Sbjct 225887 CAGCGCCTCATCTTCGCCGGAAAGCAGTTGGAAGATGGACGTACGCTGAGC-GACTACAA 225945 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || | || | || | |||||||| || || Sbjct 225946 CATCCAGAAGGAGTCGACCTTGCACTTGGTGCTCCGTCTTCGTGGCGG 225993 >seq848 Length=225143 Score = 136 bits (150), Expect = 5e-27 Identities = 141/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || ||||| || || || |||||||| || || |||||||| ||||| ||| | || Sbjct 108851 TTCGTCAAAACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACTATC 108792 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || || || ||||||||||||||||| |||||||| ||||| || Sbjct 108791 GACAATGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCGCCAGACCAACAGCGATTA 108732 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593 || |||||||| |||||| | ||||||| |||||| | ||| ||||| || ||||||| Sbjct 108731 ATCTTTGCTGGAAAGCAATTGGAGGATGGACGTACCTTGAGC-GACTACAACATCCAAAA 108673 Query 27594 GG 27595 || Sbjct 108672 GG 108671 >seq519 Length=105584 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 |||||||| ||||| || |||||||||||||| | || || || || ||||| ||||| Sbjct 89250 GACAAGGAAGGAATCCCCCCAGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAA 89191 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| || |||||| | ||||| || |||| ||||| || || || || || ||| | Sbjct 89190 GATGGACGCACCCTATCGGACTACAACATCCAGAAGGAGTCGACCCTCCACCTCGTCCTC 89131 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 89130 CGACTCCGTGGTGG 89117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570300326892560