Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq14 96.9 3e-15 >seq14 Length=161381 Score = 96.9 bits (106), Expect = 3e-15 Identities = 263/399 (66%), Gaps = 8/399 (2%) Strand=Plus/Minus Query 30062 ACGTAAAACTGAC---ACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30118 ||||| |||||| ||||| ||||| || || || ||||| ||||||| Sbjct 120653 ACGTAGAACTGAGCAAACATG---TGGCAAGGGGGGAGGGCCATTTTCGTCAAGTCTGCA 120597 Query 30119 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30178 || ||||| || | || |||||| || | || | || |||||| | | ||||| | Sbjct 120596 GGATTCCATGCACTCAAGATGATTCGGCGATCGTAAGGCTTGTTCTTCAGTTTGTCCATG 120537 Query 30179 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCT 30238 || | ||| |||||||| || || | || |||| ||| ||| ||||| Sbjct 120536 ATGTCTGCCAGTTGATCCACGCCTTGACCGGTATAATCTGTCCTTGCATCCACATACTCG 120477 Query 30239 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30298 ||||| ||||| | ||| ||||||||||| |||||||| ||||| || ||||| | ||| Sbjct 120476 GCTCCAAAATGTCGCCATTGGAACCCGTAGACCGGTCCAAGGTCACCTTCTTCACGGTG- 120418 Query 30299 TCGAAGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30357 | || || | |||| | | | || | | ||||| |||||||||| || | || Sbjct 120417 GCTTAGACCGACGCTGTCGAGATATTCGCGGCTGCCGTTTCCGTCCCAGATTTTGATGCC 120358 Query 30358 CTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCAC 30417 || || || || ||| || ||| | ||| |||||||| || || || | | Sbjct 120357 CTGGTCCGAAAGTGGTTTCGAAGACGTGCATCCTGCAACGAACCAGAGTAGTTCAGCAAT 120298 Query 30418 GACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 || || | ||||| ||||| || ||||| || || Sbjct 120297 TACAGCACGTAAGAAGACTCTCTTTGTGGTGAGAAGTGG 120259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406303402953996