Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq14 95.1 9e-15 >seq14 Length=161381 Score = 95.1 bits (104), Expect = 9e-15 Identities = 248/376 (66%), Gaps = 2/376 (1%) Strand=Plus/Minus Query 27348 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 27407 |||||| || || || ||||| ||||||| || ||||| || | || |||||| Sbjct 120633 GTGGCAAGGGGGGAGGGCCATTTTCGTCAAGTCTGCAGGATTCCATGCACTCAAGATGAT 120574 Query 27408 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC 27467 || | || | || |||||| | | ||||| | || | ||| |||||||| || Sbjct 120573 TCGGCGATCGTAAGGCTTGTTCTTCAGTTTGTCCATGATGTCTGCCAGTTGATCCACGCC 120514 Query 27468 CATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAA 27527 || | || ||| ||| ||| ||||| ||||| ||||| | ||||||||| Sbjct 120513 TTGACCGGTATAATCTGTCCTTGCATCCACATACTCGGCTCCAAAATGTCGCCATTGGAA 120454 Query 27528 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTC-TTGTCCAAAA 27586 |||||| |||||||| ||||| || ||||| | ||| | || || | |||| | | Sbjct 120453 CCCGTAGACCGGTCCAAGGTCACCTTCTTCACGGTG-GCTTAGACCGACGCTGTCGAGAT 120395 Query 27587 AGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGT 27646 | || | | ||||| |||||||||| || | |||| || || || ||| || Sbjct 120394 ATTCGCGGCTGCCGTTTCCGTCCCAGATTTTGATGCCCTGGTCCGAAAGTGGTTTCGAAG 120335 Query 27647 TTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCT 27706 ||| | ||| |||||||| || || || | | || || | ||||| |||| Sbjct 120334 ACGTGCATCCTGCAACGAACCAGAGTAGTTCAGCAATTACAGCACGTAAGAAGACTCTCT 120275 Query 27707 TGGTCGTGAGGAGGGG 27722 | || ||||| || || Sbjct 120274 TTGTGGTGAGAAGTGG 120259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369500836739603