Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq782 165 1e-35 seq549 86.0 9e-12 >seq782 Length=233898 Score = 165 bits (182), Expect = 1e-35 Identities = 449/683 (66%), Gaps = 6/683 (1%) Strand=Plus/Minus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 |||||||| || | |||||||| | | |||||| |||| | | || || ||||| Sbjct 99905 CCAGGGCACTCGTGAGGGCACATGAGAGTCCAGTCGCCATTCTGTTCGACGCGCTTCATG 99846 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 || || || || ||||| | ||| || ||||| || | | |||||| || || Sbjct 99845 AACAGGTCGGGAATCCACAAGGCATAGAAAAGATCACGAGCACGCGCTTCTTCTTTGCCG 99786 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 |||||| | ||||| | | | | | ||| | |||||||| || || || || Sbjct 99785 TGGTTCTTTCTCAGATCTAACCAGTTGAAGACATCGGCGTGCCATGGCTCGAGGTAGATG 99726 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | ||||| || || || || || ||||| | || | || || | | | Sbjct 99725 GCGAATGCACCAGGACGCTTGTTGCCACCTTGATCAACGTAGCGAGCAGTCGCGTCAAAG 99666 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 || | | ||| |||| || |||||| ||||| || |||||||| ||| || |||| Sbjct 99665 ACACGGAGCATAGGAACAAGACCGTTCGATGTGCCGTTTGTTCCTCCAATGTATGATCCA 99606 Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314 | || || || | ||| | || || || || || |||| || || | ||| Sbjct 99605 GTGGCTCGGATGCGATGTATGTTAAGGCCGATACCACCAGCGGTCTTTGAAATCATAGCA 99546 Query 78315 CAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAA 78374 ||| || | || |||||||||||||| || ||||| ||| || ||| || || || Sbjct 99545 CAAGTCTTGAGGGTGTCGTAGATACCCTCGATGCTGTCCTCCTTCGTGTCAATGAGGAAG 99486 Query 78375 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTA 78434 || || | ||| | ||| || ||||| || || | ||| || || || ||||| Sbjct 99485 CAAGACGAGAGTTGCGGTTGAGGTGTGCCTGCGTTGAAAAGTGTAGGGGAGGCGTGCGTG 99426 Query 78435 AACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATG 78493 || |||| | ||| | |||| |||||||| | || || ||||| |||||| | || Sbjct 99425 AAGTATTTGTTAGACATGTAG-TTGTATGTCTGTATGGCAGATTCAATGTCCTCTCCGTG 99367 Query 78494 AATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTAT 78553 ||| || || || |||||||| | |||||| || || | ||| | ||| |||| Sbjct 99366 AATGCCGACTGCCACACGCATGATCATATGTTGTGGACGCTCAGCGACCTTGCCGCTTAT 99307 Query 78554 TTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 78611 | | | ||||||| |||| ||| || || ||||| || | ||| ||||| ||| Sbjct 99306 TCGGAGTAGGTATGATCGCTCCAGAGTCTTGAAGCCAAAGTATTGGTAATTGAAA--TCT 99249 Query 78612 CTCTCGTAAATAATAACAGAATT 78634 || ||||| | ||| |||| || Sbjct 99248 CTGTCGTATACAATGGCAGAGTT 99226 Score = 109 bits (120), Expect = 8e-19 Identities = 376/582 (65%), Gaps = 16/582 (3%) Strand=Plus/Minus Query 76770 TTCTT-ATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACAT 76828 ||||| ||| | || ||||| || || | || || | | || || || |||||||| Sbjct 101148 TTCTTGATCGACAGTGAACTGGATGGGTGCTGAAGCAGCCATGGTTCGGAGGTAGTACAT 101089 Query 76829 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACT 76888 ||||| || ||||||| |||| || || |||||| || | ||| | Sbjct 101088 TCCAGTCTTGAGACCCATCTTCCAACCAGCAAAGTGCATGGAAGTAATCTTGC-----CC 101034 Query 76889 AGGATCGGCT-----ATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTA 76943 | | |||||| || ||||| |||| |||| |||||| ||||| || || | | Sbjct 101033 ATGGTCGGCTCTTTCATGTGAATGTTCAAGCTCTGAGATTGATCAATGAAGGCGCCACGA 100974 Query 76944 TCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGT 77003 || || ||||| | |||||||| || |||||||||| || ||| ||| Sbjct 100973 TCCGCAGCCATGGTGATAATGGTACGCTGGCTGATTTCCCAAACCGTCTTGTAAAGGGCC 100914 Query 77004 TTGATATCATCTGGAAGGTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTA 77060 ||||||||||| |||| || | | || || || |||||||| |||| || || | Sbjct 100913 TTGATATCATCGGGAATATTAGGAATGTTCTGGATAGAACCACCCTCTGCAATGATACGA 100854 Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTA 77120 ||||| || | || ||| | | |||| | | || | || || || || Sbjct 100853 TTCTTCATGTTGTCCGACCAAAGACCCATCTCGACGAGATCTTTGAGCAGCCATGGGTTG 100794 Query 77121 ACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 77180 || | ||| ||||| |||| | || | ||||| ||| ||||| || ||||| || Sbjct 100793 ACGACTTGGAATTCCCCAGCAAGCACACGACGAGAGTAGATATTTGACGTGTATGGCTCG 100734 Query 77181 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAAT 77240 | | || ||| || | |||||||| || ||||||||||||||||| | || ||| Sbjct 100733 AAGCACTCGTTGAAACCGAGAATTTGAGATGTGGAAGCAGTTGGCATAGGAG-CAACAAG 100675 Query 77241 AAACTA-TTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAG 77299 || | || | | ||| || | |||| | | | || || | | ||| ||||| || Sbjct 100674 AAGTGAGTTGCGAATACCGTGCTTCTTGATATCAGCCTTGAGCGAGTCCCAGTCCCAGAG 100615 Query 77300 ATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCC 77341 ||| | ||| || | ||| | ||||| || ||||| || Sbjct 100614 ATCCGTAGGAGTGACGTTCCACATGTCGTACTGGAGAATACC 100573 >seq549 Length=285283 Score = 86.0 bits (94), Expect = 9e-12 Identities = 168/248 (68%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 48438 TCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATC 48497 ||||| || || ||||| || || || ||||| |||||||| |||| ||||||| | | Sbjct 207343 TCGGAATGGATGTTTTCCATGGCGATTTGAAAACCGTAAAAGCATCGGGCTTCTGGAACC 207402 Query 48498 TGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCA 48557 || || || | | ||| ||||| | ||||| || || || ||||| || || Sbjct 207403 TGAACTTCGTTGCTAAAACGTTCGAGGAGGTTCTCGTTGACGATGCCATCCGATGCTGCG 207462 Query 48558 AAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT---TTATTCCAG 48614 |||||||| | | ||| || ||| | ||||| | |||| || |||||| Sbjct 207463 AAAAATGCGAGAATGTGTGAGATGAAAAAGCGTTCGTCGTCGTTCAGGCGGTTGTTCCAG 207522 Query 48615 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTT 48674 || | ||||| || | ||| | ||||| || ||||||||||| ||| ||| || Sbjct 207523 TCTGGAACGTCTTTGGAGAGATCGATCTCTTCGGCGGTCCAAAATGAGGCCATTGCCTTC 207582 Query 48675 TTATACAT 48682 || ||||| Sbjct 207583 TTGTACAT 207590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694656530412320