Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq859 111 4e-19 seq519 89.7 1e-12 seq848 84.2 5e-11 >seq859 Length=478526 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| || || || ||||||||||| |||| || || | |||||||| | Sbjct 225745 CAAG-TGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCTTCGA 225687 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||||||||| | | ||||||||| | | ||| || ||||| || || | Sbjct 225686 GTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGA 225627 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | | ||||||| ||| || || | || || || |||| Sbjct 225626 TCTTGGTCTTGACATTGTCGATGGTGTCTGATGACTCAACCTCCAAGGTGATGGTCTTGC 225567 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| | |||||| ||||||| ||||| Sbjct 225566 CCGTCAAAGTCTTGACGAAGATTTGCAT 225539 Score = 111 bits (122), Expect = 4e-19 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCC 151965 || ||||| || ||||||||||| ||| | || | |||||||| | ||||| | Sbjct 225963 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGTCCATCTTCCAACTGCTTT--C 225906 Query 151966 CGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTT 152025 |||||||||| || | ||||||||| | | || |||||||| || || || || | Sbjct 225905 CGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTCGTCT 225846 Query 152026 TGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085 |||| | || | | |||| || || ||||| || |||||||| ||||| ||||| | Sbjct 225845 TGACGTTGTCGATGGTGTCAGAGGATTCAACTTCTAGTGTAATAGTCTTGCCGGTGAGGG 225786 Query 152086 TCTTCACGAAGACCTGCAT 152104 |||||||||||| ||||| Sbjct 225785 TCTTCACGAAGATTTGCAT 225767 Score = 102 bits (112), Expect = 2e-16 Identities = 142/197 (72%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||||||||| ||||| || ||||| || ||||||||||| |||| | |||| Sbjct 225529 GAGGCGGAGGACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCG 225470 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || ||||||||||| | | ||||||||| | | |||||| || Sbjct 225469 GCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTC 225410 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGA 152063 ||| |||||||| || ||||| | || | | ||| ||| | ||| || ||||| Sbjct 225409 CTTGTCTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCGCTGGA--CTCAACCTCAAGG 225352 Query 152064 GTAATAGTTTTGCCCGT 152080 || || || || || || Sbjct 225351 GTGATCGTCTTTCCGGT 225335 >seq519 Length=105584 Score = 89.7 bits (98), Expect = 1e-12 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||||| |||||| || || || || ||||| || ||||||||||| || | || || | Sbjct 89125 GAGTCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGATAGGGTGCG 89184 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || || ||||||||||| | | ||||||||| | | ||||||||| Sbjct 89185 TCCATCTTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATTCCTTC 89244 Query 152006 CTTTTCT 152012 ||| ||| Sbjct 89245 CTTGTCT 89251 >seq848 Length=225143 Score = 84.2 bits (92), Expect = 5e-11 Identities = 138/196 (70%), Gaps = 5/196 (3%) Strand=Plus/Plus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA--GGC 151959 |||| ||| | | | |||||||||||||| ||| || || | ||||| || | || Sbjct 108659 TGAAAAGTCG-CACCTTTTGGATGTTGTAGTCGCTCAAGGTACGTCCATCCTCCAATTGC 108717 Query 151960 TTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTT 152019 ||| || || ||||| | | ||| ||||| | || ||||| ||||| ||||| || | Sbjct 108718 TTT--CCAGCAAAGATTAATCGCTGTTGGTCTGGCGGAATTCCCTCCTTGTCTTGGATCT 108775 Query 152020 TTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCG 152079 | |||||| | || | |||| || ||| || ||||| || || || ||||||| Sbjct 108776 TGGTCTTGACATTGTCGATAGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCG 108835 Query 152080 TGAGAGTCTTCACGAA 152095 |||| || || ||||| Sbjct 108836 TGAGGGTTTTGACGAA 108851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153799911156123