Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq859 140 2e-28 seq848 86.0 5e-12 >seq859 Length=478526 Score = 140 bits (154), Expect = 2e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| | || |||||| ||||||||||| ||| || || | || || Sbjct 225976 CACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGTCCATCTTC 225917 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||| ||||| ||||| | |||||||| |||| ||| | ||||||||| ||| Sbjct 225916 CAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCTTCCTTGTCCTG 225857 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||| | | | |||||||| | |||||| || || | ||||| ||||| Sbjct 225856 GATCTTCGTCTTGACGTTGTCGATGGTGTCAGAGGATTCAACTTCTAGTGTAATAGTCTT 225797 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||||||||||||||||||||||||| Sbjct 225796 GCCGGTGAGGGTCTTCACGAAGATTTGCAT 225767 Score = 127 bits (140), Expect = 1e-24 Identities = 158/212 (75%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 |||| ||| || ||| ||||| ||||||||||| |||| | || || || | || || Sbjct 225747 ACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGC-CATCTTC 225689 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| ||||| |||||||| |||||||| |||| || | ||| ||||| ||| Sbjct 225688 GAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTG 225629 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | |||||||| | || || ||||||| || || ||| Sbjct 225628 GATCTTGGTCTTGACATTGT--CGATGGTGTCTGATGACTCAACCTCCAAGGTGATGGTC 225571 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| | ||||| |||||||||||||| Sbjct 225570 TTGCCCGTCAAAGTCTTGACGAAGATTTGCAT 225539 Score = 109 bits (120), Expect = 4e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||| |||||| ||||||||||| |||| ||| || | || || Sbjct 225519 ACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCG 225460 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| |||||||| |||||||| |||| || | || ||||| || Sbjct 225459 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGA 225400 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | ||||||||| ||| || ||||| | || ||||||||| Sbjct 225399 ATCTTGGTCTTGACGTTGTCGATGGTGTCGCTGGACTCAACCTCAAGGGTGATCGTCTTT 225340 Query 44309 CCCGT 44313 || || Sbjct 225339 CCGGT 225335 >seq848 Length=225143 Score = 86.0 bits (94), Expect = 5e-12 Identities = 132/184 (72%), Gaps = 6/184 (3%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||||||||||||| ||| | || | || | || |||| ||||| || |||||| Sbjct 108671 CCTTTTGGATGTTGTAGTCGCTCAAGGTA-CGTCCATCCTCCAATTGCTTTCCAGCAAAG 108729 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATG 44264 || || ||||| || |||| || | || ||||| || ||||| ||| || || Sbjct 108730 ATTAATCGCTGTTGGTCTGGCGGAATTCCCTCCTTGTCTTGGATCTTGGTCTTGACATTG 108789 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 | | || ||||| | ||| || ||||| | || || ||||| ||||||||||| || | Sbjct 108790 T--CGATAGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTTTTGA 108847 Query 44325 CGAA 44328 |||| Sbjct 108848 CGAA 108851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359984200627821