Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq859 154 4e-32 seq519 93.3 1e-13 >seq859 Length=478526 Score = 154 bits (170), Expect = 4e-32 Identities = 158/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || ||||| || || || || || || || || ||| ||| ||| Sbjct 225770 CAAATCTTCGTGAAGACCCTCACCGGCAAGACTATTACACTAGAAGTTGAATCCTCTGAC 225829 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| ||||| || ||||| |||||||| Sbjct 225830 ACCATCGACAACGTCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAGCAG 225889 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| ||| | ||||||||| | || || ||| || ||| || Sbjct 225890 CGCCTCATCTTCGCCGGAAAGCAGTTGGAAGATGGACGTACGCTGAGCGACTACAACATC 225949 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || |||| |||| Sbjct 225950 CAGAAGGAGTCGACCTTGCA-CTTG 225973 Score = 145 bits (160), Expect = 2e-29 Identities = 143/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || ||||| ||||||||||| ||||| || | ||||||||||| |||||||| Sbjct 225335 ACCGGAAAGACGATCACCCTTGAGGTTGAGTCCAGCGACACCATCGACAACGTCAAGACC 225394 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 |||||||| ||||| || |||||||| || |||||||| || | ||||||||||| || Sbjct 225395 AAGATTCAAGACAAGGAGGGAATCCCACCAGACCAGCAGCGCTTGATCTTCGCCGGCAAG 225454 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 |||||||| ||||| | || || |||| || ||| |||| || || || ||||| || Sbjct 225455 CAGCTCGAGGATGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCCACACTTCAC 225514 Query 178125 CTTGT 178129 ||||| Sbjct 225515 CTTGT 225519 Score = 141 bits (156), Expect = 2e-28 Identities = 159/209 (76%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||| | || || || || |||||| | ||||| || |||||| Sbjct 225542 CAAATCTTCGTCAAGACTTTGACGGGCAAGACCATCACCTTGGAGGTTGAGTCATCAGAC 225601 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| || || ||||| || |||||||| Sbjct 225602 ACCATCGACAATGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAGCAG 225661 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | ||||||||||| || || ||||||||||| | || |||| |||| || ||| | Sbjct 225662 CGCTTGATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCAC-CTTGTCCGACTACAACAT 225720 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTT 178131 ||| || ||||| || || || |||| || Sbjct 225721 CCAGAAGGAATCCACTCTCCA-CTTGGTT 225748 >seq519 Length=105584 Score = 93.3 bits (102), Expect = 1e-13 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| ||||||||||| || |||||||| || | ||||||||||| || ||||||||| Sbjct 89250 GACAAGGAAGGAATCCCCCCAGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAA 89191 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||||| | || || | || || ||| |||| || || || || || || || || Sbjct 89190 GATGGACGCACCCTATCGGACTACAACATCCAGAAGGAGTCGACCCTCCACCTCGT 89135 Score = 84.2 bits (92), Expect = 5e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || ||||| || || || ||||||||||||||||| ||| ||| Sbjct 89392 CAGATTTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCCTCCGAC 89333 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGG 178014 ||||| || || ||||| |||||||||| Sbjct 89332 ACCATTGACAATGTCAAGACCAAGATTCAGG 89302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203709407575122